| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3172 |
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| Symbol | |
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| ID | 4019698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3805298 |
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| End bp | 3806647 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637957222 |
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| Product | poly(A) polymerase |
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| Protein accession | YP_564171 |
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| Protein GI | 91794520 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000541948 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGTCTTG ATATCATTTC CAGAGATGGT CACGATATTT CTCGGAGACA GATCAGTGAA
AATGCCCTTA AAGTTCTCTA TCGCTTAAAT AAATCAGGCT ATAAAGCCTA TTTAGTCGGC
GGTGGGGTTC GCGATATTTT GTTGGGTTTA GAGCCTAAAG ACTTCGACGT GGTCACCAAC
GCCACCCCTG ATGAAATCAA GGCCCTGTTT CGCAATTGCC GTTTAGTCGG TCGCCGTTTT
AGATTAGCGC ATATCGTTTT TGGTCGTGAT GTTATCGAAG TCGCCACTTT CCGTGGTCAT
CACGGCGAGA ACAGCGACAA CATCTCTAAA TCGAATGCCG AAGGACGCCT GTTACGTGAC
AACGTTTATG GCGAAATAGA TGAAGACGCC GAGCGCCGTG ATTTCACAGT CAACGCCTTA
TATTATGATA TCAGTGATTA TTCTATCCGC AGCTATGGCG GCGGCATGGA TGACTTGCGC
AATAAAAGCA TCAAGATGAT TGGCGATCCT GAGACGCGCT ACCGTGAAGA TCCTGTGCGT
ATGTTAAGGG CGGTTCGCTT TGCCACTAAA TTAGATATGC AGATTGATCC TGTCACTGCA
GCGCCTATTA CTGAGTTAGC AAGCCTATTG GCCGATATTC CAGCTGCGCG CATGTATGAA
GAAGTGCTGA AACTCTTTTT TGCCGGCAAA GCTGAAGCCA ATTTCGAATT AATGCTAAAA
TTTGGCTTAT TTGCGCCGCT ATTCCCACAA GTTCAGGCCC TATTGGACGA GTCACCAAAA
GGTGATACCG CCCGTATGGT GCGCGCCATC ATGCGCAATA CCGATCTTCG CGTCAGCCAA
GACAAACCTG TCACCCCCGC CTTCTTCTAT GCCGCTATGC TTTGGTACCC CCTTAAGCGC
CGCGCCGAAG ATATGGCGAT GGAAATAGGC CTAAGTGCTT ATGATGCTCA CGTTGCCGCC
ATGGGTGATG TGATGGAGCA GCAGTGTCAA ACCATCAGCA TTCCTCGTCG TTTTAGCACC
CCGGCAAAAG ACATTTGGCA GTTACAGTTA CGTCTTGAGC GCGGCCAAAA TACCCGCTCC
TTCAAGTTAT TCGAGCATCC AAAGTTCCGC GCAGCTTATG ATTTACTGCT GCTTAGGGGC
GAGACAGAAG CTGGCACTAT CGCCAAATCG GCCACTTGGT GGCAAACCTT TGTCGATGCC
GATGAAGACA CCCGTAGCAA GTTCGTGAAA GAATCGAGCA AGGGCGGTAG TCGCAATCGC
AGCACAGGCA CGAGAAAACG ACGTAAGCCA AGTGCCACAA ACAGTGCTGC TAAGAGTGCT
GCCCCAAGCG CGAATAAAAC TCCCGATTAA
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| Protein sequence | MRLDIISRDG HDISRRQISE NALKVLYRLN KSGYKAYLVG GGVRDILLGL EPKDFDVVTN
ATPDEIKALF RNCRLVGRRF RLAHIVFGRD VIEVATFRGH HGENSDNISK SNAEGRLLRD
NVYGEIDEDA ERRDFTVNAL YYDISDYSIR SYGGGMDDLR NKSIKMIGDP ETRYREDPVR
MLRAVRFATK LDMQIDPVTA APITELASLL ADIPAARMYE EVLKLFFAGK AEANFELMLK
FGLFAPLFPQ VQALLDESPK GDTARMVRAI MRNTDLRVSQ DKPVTPAFFY AAMLWYPLKR
RAEDMAMEIG LSAYDAHVAA MGDVMEQQCQ TISIPRRFST PAKDIWQLQL RLERGQNTRS
FKLFEHPKFR AAYDLLLLRG ETEAGTIAKS ATWWQTFVDA DEDTRSKFVK ESSKGGSRNR
STGTRKRRKP SATNSAAKSA APSANKTPD
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