Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3170 |
Symbol | |
ID | 4019696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3803692 |
End bp | 3804135 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637957220 |
Product | RNA polymerase-binding, DksA |
Protein accession | YP_564169 |
Protein GI | 91794518 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1734] DnaK suppressor protein |
TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000043315 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGAAG GCACTAAAAA ACTCGGCGTA CTCGCTATCG CAGGAGTCGA TCCTTACCAA GAGAAAGCCG GTGAGGAATA CATGAATCCA AAGCAGCGAA GTCACTTTAA AGTGATCCTC GAGGCTTGGC GTAATCAATT ACGTGAAGAA GTTGACCGTA CCCTATCTCA CATGCAAGAC GAAGCGGCAA ACTTCCCAGA TCCGGTCGAT CGTGCTGCTC AAGAGGAAGA ATTCAGCTTA GAGTTACGCG CTCGTGATAG AGAACGTAAA CTCATTAAGA AAATTGAAAA AACCCTGCAA AAAATTGAAG AAGACGATTT CGGCTTCTGC GATTCTTGTG GTGTTGAAAT TGGTATCCGT CGCTTAGAAG CGCGTCCAAC AGCCGATCAG TGTATCGATT GTAAGACGTT AGCCGAGATC AAAGAAAAGC AAATGGCGGG CTAA
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Protein sequence | MPEGTKKLGV LAIAGVDPYQ EKAGEEYMNP KQRSHFKVIL EAWRNQLREE VDRTLSHMQD EAANFPDPVD RAAQEEEFSL ELRARDRERK LIKKIEKTLQ KIEEDDFGFC DSCGVEIGIR RLEARPTADQ CIDCKTLAEI KEKQMAG
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