| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3103 |
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| Symbol | |
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| ID | 4019629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3732027 |
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| End bp | 3734459 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637957154 |
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| Product | peptidase S16, lon-like protein |
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| Protein accession | YP_564103 |
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| Protein GI | 91794452 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATAG AACGATTAAC CACAGAGCAA GTTTACCGCA CCTCGTCATT ATCCCAACTC
GACCCCATGT TACGTACCAC CAAGCAATTA ACCCCACTGG ATGAAATTGT CGGCCAAGAA
AGAGCGCAGC AAGCGGTCGA ATTTGCCATG TCCATTAAGG ATAAAGGGTA TAACATCTAT
GCCGTCGGTC GTAATGGCCT TGGCAAACGC ACCATGATGC AAAGGTACCT CAATCGCCAT
CAGCCGATGA AAGGCCAGCA GTCATTTGAT TGGTGTTATG TGGCCAATTT TGATGATGCA
CGAATCCCAA AAGTATTAAA GCTGCCCGCG GGTAGCGCGC TGGCATTAAA AAAAGCCATC
GATAACCTGT TACAGCAGTT GATGAAGGCG CTACCCCAAG CCTTCGATAC GGAAATCTAT
TACACCCGCT CCGAAAAATT GAAAAATCAG CTGTTAAAAA AACAAGAATC AGCGCTGCTA
AGCCTGACCA AAGAAGCCAA ATCCCAAGGT GTAGTGTTAA GTATTTCCGC CGAAGGAGAT
TATCAACTGT TTGCCCTCAA TGGCGACGAA CCTCACGATG AGGCTTCATT CGAACGGCTT
AGTGAAAAAG AAAAAAGCGC CTTTGAGACC AGCATAGCCT CATTGGAAAT AAAATTAAGA
GGCATCCTGC GTAAACTGGC GCAATGGGAA GATGAGTTTT GCGACAAGCA AGATAAACAC
AATGAACAAG TCGCCAACAA GGTATTCATT AAGGCCTTCG ATCCGTTAAA AGAAACCTTT
CGTCAGTTGC CACAAATCAA AGCCCACCTC AACGCCATGC AAAAGGACAT GCTAGATAAC
ATAGATATCT TCATGGAAGA AAGTGAGGAA CTCGTGGGCC TTGCCTATGC TTCTTTAGAT
AAAAAACTGC CGCGCCGTTA TCAAGTCAAT GTCTTGGTAA GCCAAGATGA GACCCCCTTC
CCCATTGTGG TGGAAGAAAG CCCTAACTAT CACACCATCT TTGGTTACAT AGAAAACGCC
ACCTACAAAG GCACAGTGTT CACCGACTTT TCACTTATCC GCTCTGGCAG TCTGCACAAA
GCCAATGGCG GCGTGTTAAT GATAGATGCG GTCAAGGTGT TGGAGCGCCC CTATGTGTGG
GATGGGCTCA AGCGAGCCTT AAGATCGCGA AAACTGAATT TAAACTCACT GGAGCAGGAG
CTTACGCTGT CGGGCACCAT CTCACTGGAA CCTGAACCTA TTCCACTTAA TGTCAAAATC
ATCTTGTTTG GTGATTATCA AACTTATCAG CTATTACAGA ATTACGACTC CGAATTCAGT
GAGTTATTTA GGGTAACTGC AGATTTTGAA GATGAAATGC CCCGTACAGA TAGCTCAGAA
GAAAACTATG CCCGCTTCAT TGCCAGCATA GTGCACGACA ACCACATGCT CCATTGTGAT
AAGAGCGCCA TCGCCAGAAT AATAGAATAC AGTTCACGTC AGGCTGGGGA TCAACATAAG
CTGTCCTTGC ATTCGGCGGA TATCGCCAAT TTATTACGGG AAACCAATTA TTGTGCTCGC
CAAGCCAATG CCAGAACCAT ACGTAAACAA CATGTGGAGC AGGCGCTATT TAAGCAAGAG
CAAAGGGTGA GTCGCCTTAA AGACAGCATG ATGCAAGATT TTGCCAATGG CACTCTGTTG
CTGCAGACTC AAGGCGAGGC CATAGGTCAG ATCAATGCGT TATCCGTATT GAGCACTACA
GATCATAGCT TTGGCATCCC AACTCGAATC ACCGCAACCA CAGCAAAAGG CAAGGGGGAG
ATTTTTGATA TCGAGCATCA TGCCAAACTA GGGGGTAAAA TCCATTCAAA AGGAGTGATG
ATCCTCTCTG CTTATTTGAA ATCCATTTTT GCCAAAGAGA ACATACTGCC CTTCTGCACT
CACTTAACCT TCGAGCAGTC TTACAGCGGT GTCGATGGAG ATAGCGCCTC CATGGCAGAG
CTATGCGCTA TCGTCTCGGC ATTCTCACAA CAGCCACTTA GACAAGATAT CGCCATTACA
GGCTCGATGA ATCAATTCGG TGAAGCCCAG CCCATCGGTG GGGTGAATGA AAAAATTGAA
GGCTTTTTCG ATGTGTGTAG CATTAAAGGC CGCAGCCAAT ATCAGGGCGT TATCATCCCT
AAAAGCAACG TCCATCATTT GATGTTAAGA CAAGACATTG TCGATGCTAT CGCCCAAGGG
AGCTTTCATA TTTGGTCCAT AGAACATGTA ACAGAAGCAC TGACCGTATT GACCCAAGGA
ATAGATATTA GCCAACACTT AGACGCTGGA AAATCTGAAC AAAAACAGCA GACTTTAACC
GTACTAGAAC TTAAGCAGGC AACCTTTGCC TTAGCTCAAC AGCGAATTAA CTTAAAACAA
AAAAAAGTGA ATATAGAGGA TAAAAAAGCA TAA
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| Protein sequence | MTIERLTTEQ VYRTSSLSQL DPMLRTTKQL TPLDEIVGQE RAQQAVEFAM SIKDKGYNIY
AVGRNGLGKR TMMQRYLNRH QPMKGQQSFD WCYVANFDDA RIPKVLKLPA GSALALKKAI
DNLLQQLMKA LPQAFDTEIY YTRSEKLKNQ LLKKQESALL SLTKEAKSQG VVLSISAEGD
YQLFALNGDE PHDEASFERL SEKEKSAFET SIASLEIKLR GILRKLAQWE DEFCDKQDKH
NEQVANKVFI KAFDPLKETF RQLPQIKAHL NAMQKDMLDN IDIFMEESEE LVGLAYASLD
KKLPRRYQVN VLVSQDETPF PIVVEESPNY HTIFGYIENA TYKGTVFTDF SLIRSGSLHK
ANGGVLMIDA VKVLERPYVW DGLKRALRSR KLNLNSLEQE LTLSGTISLE PEPIPLNVKI
ILFGDYQTYQ LLQNYDSEFS ELFRVTADFE DEMPRTDSSE ENYARFIASI VHDNHMLHCD
KSAIARIIEY SSRQAGDQHK LSLHSADIAN LLRETNYCAR QANARTIRKQ HVEQALFKQE
QRVSRLKDSM MQDFANGTLL LQTQGEAIGQ INALSVLSTT DHSFGIPTRI TATTAKGKGE
IFDIEHHAKL GGKIHSKGVM ILSAYLKSIF AKENILPFCT HLTFEQSYSG VDGDSASMAE
LCAIVSAFSQ QPLRQDIAIT GSMNQFGEAQ PIGGVNEKIE GFFDVCSIKG RSQYQGVIIP
KSNVHHLMLR QDIVDAIAQG SFHIWSIEHV TEALTVLTQG IDISQHLDAG KSEQKQQTLT
VLELKQATFA LAQQRINLKQ KKVNIEDKKA
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