Gene Sden_3086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3086 
Symbol 
ID4019612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3708227 
End bp3708724 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content44% 
IMG OID637957138 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_564087 
Protein GI91794436 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCATTG AAGTAAGGCG GACTGAGCCG TCAGATGCCA AAGCGATAAA AGAAATCTAT 
GAATGCCAGA ATGCTTACAG CGACACATTA CAACTGCCAT TTCCATCTGC TGATATGTGG
GAAAAACGAC GTCAAAATGT ACCTGACCAT GTTTACGCGT ATGTTGCGGT CATCGATGGT
GAGGTAGTGG GCAATATAGA TTTTGAAGTC TGCACCAATC CGAGGCGACG TCACGTAGCT
ACATTCGGCA TGGGTATTAA AGACAAGGTT CAGGGCCTAG GTGTCGGTAG CGCTCTACTT
GAAACGGTTA TAGATTTGGC TGACAACTGG CTCAACCTTA AGCGAATTGA ACTGACGGTT
TATGTGGACA ACGAACGTGC AATCAAACTG TACAAGAAAT TTGGTTTTGA AATAGAAGGT
GAGTCCAAAG CTTATGCTTT CAGAAATGGC CACTATGTTG ATGCTTACCA TATGGCGCGG
CTTGTAACAC AGAAATAA
 
Protein sequence
MVIEVRRTEP SDAKAIKEIY ECQNAYSDTL QLPFPSADMW EKRRQNVPDH VYAYVAVIDG 
EVVGNIDFEV CTNPRRRHVA TFGMGIKDKV QGLGVGSALL ETVIDLADNW LNLKRIELTV
YVDNERAIKL YKKFGFEIEG ESKAYAFRNG HYVDAYHMAR LVTQK