| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3072 |
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| Symbol | |
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| ID | 4019598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3690884 |
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| End bp | 3691363 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637957124 |
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| Product | hypothetical protein |
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| Protein accession | YP_564073 |
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| Protein GI | 91794422 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0660116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGCTTT CAAATCCTAT TATAATTTGG GCTAGCCTAG GACTAGTGCT GATGTTAGCC
GAAATTATTG TGCCAGGAGG CATAGTGGTG TTACTCGGCA TGGCTAGCCT GTTAGTGGCT
GGCGCGTTAG CATTGGGGGT TGTCGAAGGA ATAGTTCAAA GCCTGACCTT ATGGTTTATC
CTGTCCATTG TATTATTGTT GAGTTTTAGG CATATCACCC AAGGGCTCAT AGGCGGTGAT
TCACACCAAG ACAATACCGA TGAAGAGTTA GATCTTTATA ATAAAATCGC CTTAGTTAAA
GAGGCGATAG GGCCGGGCGA AAAGTCAGGT CGTGTGACAT TTCAAGGCGC AGATTGGCCT
GCATTGGGTG ATGGCAGTGA AATTCTTGTC GGTACTCAAG TAAGGATCAT TTGCCGGGAA
AATATTGCAC TTATAGTCGA GCCTTGTCCA TATCCAGAGA CACAATCAGT TTCATCTTAA
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| Protein sequence | MELSNPIIIW ASLGLVLMLA EIIVPGGIVV LLGMASLLVA GALALGVVEG IVQSLTLWFI
LSIVLLLSFR HITQGLIGGD SHQDNTDEEL DLYNKIALVK EAIGPGEKSG RVTFQGADWP
ALGDGSEILV GTQVRIICRE NIALIVEPCP YPETQSVSS
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