Gene Sden_3070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3070 
Symbol 
ID4019596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3688977 
End bp3689924 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content46% 
IMG OID637957122 
Productband 7 protein 
Protein accessionYP_564071 
Protein GI91794420 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.358492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAT TAATGAGTTC GAATTTGCTG CAGACTAATT TTGCCGTGAT GATTATTTGG 
GGGGGAATTT TTGCTATTTT CATCCTTAAA TTGTTTCAGT CTATCCGTCT AGTGCCAACC
AAGTCGGCAT ATATTGTCGA GCGTTTAGGT AAATATCACA GCACCTTAGA TGCGGGCTTT
CATGCGCTTA TTCCTTTTAT TGATAAAGTG GCCTATATCC ATGACTTAAA AGAAGAAACT
ATAGATGTGC CGCCTCAAGA GTGCTTCTCC AGTGATGAAG TGAATGTGGA GGTTGATGGG
GTGATTTATA TTTCGGTTAC CGATCCCGTT AAGGCGAGCT ATGGCATCAC TAACTATCGC
TATGCCGCGA TTCAATTAGC CCAGACTACA ACACGCTCTG TAATTGGCAC CTTAGACTTA
GATCGCACCT TCGAAGAGCG CGATCTTATC TCGGCAAAAG TGGTGGAAGT ACTGGATGAA
GCGGGGGCGA CTTGGGGGAT CCGAGTGCAT CGCTATGAAA TTAAAAATAT CACTCCACCA
GAAACCGTCA AAAATGCCAT GGAGATGCAA GTCAACGCCG AGCGTGAACG CCGGGCACTA
TTGGCGAAGA GTGAAGGCGA TAAGCAGAGT AAAATCAATC GTTCAGAAGG TGTGATGGCT
GAGACCATCA ACCGCTCAGA AGGTGAGATG CAGCGCAGGA TCAATGAGGC TGAAGGTAAG
TCAGAGGAGA TCTTAACCTT GGCTAAGGCG ACTTCTGAGT CTATTGAGCG CCTTGCCAGT
GTGATTTCAT CCCCAGGTGG CCAAAGTGCA CTGCGGATGC AACTGGGCGA GCAGTATCTA
AAACAACTGG ACGGCTTAAG TAAGAAGGAC ACTCGGGTGG TGTTGCCTGG CAACATGGTC
GATTTTGACT ATTGGTTGCA AAGCATAGGA CTTAAAGAAG ATAAGTAA
 
Protein sequence
MEELMSSNLL QTNFAVMIIW GGIFAIFILK LFQSIRLVPT KSAYIVERLG KYHSTLDAGF 
HALIPFIDKV AYIHDLKEET IDVPPQECFS SDEVNVEVDG VIYISVTDPV KASYGITNYR
YAAIQLAQTT TRSVIGTLDL DRTFEERDLI SAKVVEVLDE AGATWGIRVH RYEIKNITPP
ETVKNAMEMQ VNAERERRAL LAKSEGDKQS KINRSEGVMA ETINRSEGEM QRRINEAEGK
SEEILTLAKA TSESIERLAS VISSPGGQSA LRMQLGEQYL KQLDGLSKKD TRVVLPGNMV
DFDYWLQSIG LKEDK