Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3070 |
Symbol | |
ID | 4019596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3688977 |
End bp | 3689924 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637957122 |
Product | band 7 protein |
Protein accession | YP_564071 |
Protein GI | 91794420 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.358492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAT TAATGAGTTC GAATTTGCTG CAGACTAATT TTGCCGTGAT GATTATTTGG GGGGGAATTT TTGCTATTTT CATCCTTAAA TTGTTTCAGT CTATCCGTCT AGTGCCAACC AAGTCGGCAT ATATTGTCGA GCGTTTAGGT AAATATCACA GCACCTTAGA TGCGGGCTTT CATGCGCTTA TTCCTTTTAT TGATAAAGTG GCCTATATCC ATGACTTAAA AGAAGAAACT ATAGATGTGC CGCCTCAAGA GTGCTTCTCC AGTGATGAAG TGAATGTGGA GGTTGATGGG GTGATTTATA TTTCGGTTAC CGATCCCGTT AAGGCGAGCT ATGGCATCAC TAACTATCGC TATGCCGCGA TTCAATTAGC CCAGACTACA ACACGCTCTG TAATTGGCAC CTTAGACTTA GATCGCACCT TCGAAGAGCG CGATCTTATC TCGGCAAAAG TGGTGGAAGT ACTGGATGAA GCGGGGGCGA CTTGGGGGAT CCGAGTGCAT CGCTATGAAA TTAAAAATAT CACTCCACCA GAAACCGTCA AAAATGCCAT GGAGATGCAA GTCAACGCCG AGCGTGAACG CCGGGCACTA TTGGCGAAGA GTGAAGGCGA TAAGCAGAGT AAAATCAATC GTTCAGAAGG TGTGATGGCT GAGACCATCA ACCGCTCAGA AGGTGAGATG CAGCGCAGGA TCAATGAGGC TGAAGGTAAG TCAGAGGAGA TCTTAACCTT GGCTAAGGCG ACTTCTGAGT CTATTGAGCG CCTTGCCAGT GTGATTTCAT CCCCAGGTGG CCAAAGTGCA CTGCGGATGC AACTGGGCGA GCAGTATCTA AAACAACTGG ACGGCTTAAG TAAGAAGGAC ACTCGGGTGG TGTTGCCTGG CAACATGGTC GATTTTGACT ATTGGTTGCA AAGCATAGGA CTTAAAGAAG ATAAGTAA
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Protein sequence | MEELMSSNLL QTNFAVMIIW GGIFAIFILK LFQSIRLVPT KSAYIVERLG KYHSTLDAGF HALIPFIDKV AYIHDLKEET IDVPPQECFS SDEVNVEVDG VIYISVTDPV KASYGITNYR YAAIQLAQTT TRSVIGTLDL DRTFEERDLI SAKVVEVLDE AGATWGIRVH RYEIKNITPP ETVKNAMEMQ VNAERERRAL LAKSEGDKQS KINRSEGVMA ETINRSEGEM QRRINEAEGK SEEILTLAKA TSESIERLAS VISSPGGQSA LRMQLGEQYL KQLDGLSKKD TRVVLPGNMV DFDYWLQSIG LKEDK
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