Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3055 |
Symbol | |
ID | 4019581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3669176 |
End bp | 3669835 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637957107 |
Product | response regulator receiver |
Protein accession | YP_564056 |
Protein GI | 91794405 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATTC AGCAAACCAA TACAGCAAAG CCCAGTAAAA TTCGTGTTGG TCTGGTTGAC GACCAACAAC TTGTGCGTCA AGGAATCGCT AGCCTACTGG CGCTTTCGGA TAAGATAGAG GTCACCTGGC AAGCCGAAAA CGGTCAGCAA GCACTTACTC TACTGGCAAG CACTGCTATA GATATACTGC TCAGTGATAT AAGAATGCCT GTGATGGATG GGATAAGTTT GCTGAGCCAC ATTCGCGCCG ACAATAATCA ACTACCAACG CTTATGCTCA CCACCTTCGA TGACAGTGAA TTGTTTCTGA CCAGTTTACA TGCCGGCGCT AATGGCTTTT TATTAAAAGA TGTGTCCTTA GATAAATTAC TCAATGCCAT CGAAGTCATA GCCCAAGGCG GTGTGCTCAT TGAGCCTGTG GTTCTCAATC AATTAAGCCA ACAGGCGCCA ATTAATGCCC CTGAAGTTAA CCCGCTATCG GAGCGAGAAA CCAGCATACT TAAGTTTATG GCTAATGGCT GCTCGAACAA AGAAATAGCC ACTGGGGTAT TTTTAGCCGA AGGCACTGTC AAAAATCACG TGTCGAATAT CTTGTCCAAA CTCGGCTGTC GTGATCGCAC CCGCGCCGTG CTAAAAGGCT TAGAGTTAGG AATTATTTAA
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Protein sequence | MEIQQTNTAK PSKIRVGLVD DQQLVRQGIA SLLALSDKIE VTWQAENGQQ ALTLLASTAI DILLSDIRMP VMDGISLLSH IRADNNQLPT LMLTTFDDSE LFLTSLHAGA NGFLLKDVSL DKLLNAIEVI AQGGVLIEPV VLNQLSQQAP INAPEVNPLS ERETSILKFM ANGCSNKEIA TGVFLAEGTV KNHVSNILSK LGCRDRTRAV LKGLELGII
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