Gene Sden_3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3053 
Symbol 
ID4019579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3667319 
End bp3667774 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content42% 
IMG OID637957105 
Producthypothetical protein 
Protein accessionYP_564054 
Protein GI91794403 
COG category[S] Function unknown 
COG ID[COG4704] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTA ACAACAGTAG CAACAGTAAC AGCAAAAAAA ACACTTATAT TAGCGCCCTA 
ACACTTTTGG GTTTAAGCCT ATGCGGCGGC ATCGCCCATG GGCATACCTT AAATTTAGTG
GTAGACAATA TTCCTAAACA CACCGGTCAG TTAATGATCC AGATATTTGA TAGTAAAGAA
AAATATGACT CAGGTCGAGG GGCTTTTATA TCCGCATTAA CGCCAGTAAC CCAGACTCGC
CATGAGATTG TTTTTAGTCA ATTACCCACA GCCGATTACG CCGTCAGAAT CGTCCACGAT
GAGAATGGCA ATGGCAGTTT AGATGTTAAT TTTTTGGGCG TGCCGTTAGA AGGTTATGGT
TTTAGCAATG ATGCTGGAAG CCTGGGGCCA GCGTCTTTTG AAGATGCCAA AGTCGGCATA
GACAGCGACA TAGAACTTAT TATTCATATT CGTTAA
 
Protein sequence
MKANNSSNSN SKKNTYISAL TLLGLSLCGG IAHGHTLNLV VDNIPKHTGQ LMIQIFDSKE 
KYDSGRGAFI SALTPVTQTR HEIVFSQLPT ADYAVRIVHD ENGNGSLDVN FLGVPLEGYG
FSNDAGSLGP ASFEDAKVGI DSDIELIIHI R