| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3050 |
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| Symbol | |
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| ID | 4019576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3661140 |
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| End bp | 3664802 |
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| Gene Length | 3663 bp |
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| Protein Length | 1220 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637957102 |
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| Product | protease-associated PA |
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| Protein accession | YP_564051 |
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| Protein GI | 91794400 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000558142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAACTA AACTATCACT TGCTGTTTCA GCAGCTCTTA TTTCAGGCGC TTGTTTTGCA
GGTACTGGAG ATAAATACAA CACGACTAAT CAGTCAAATG ATGAATATGC CGGTTTACAA
GTAACCAAGT CAGAGCAAGT TAAAAAAGTA GCCTCTGCAT GGATGATAAA ACTAAATGTA
CCGTCAATTT CTCAGCAGCA CCGTACATCT AACACAGACT TTTCTTTAGC CTCTCATAAT
GTTCAGCAGT CACAACAACG TGTTAAAAGT GCAATTATGC AACTTGATGC AGATATTCAA
GTTGTAGGAC AAACGTCTAA ACTAGTGAAC TCTATTCTTG TTAAAGCAGA TAAGAGCCAG
CTTACTGCGC TTTTATCTCA CTCAGATATC GCAGATATCC TACCAATATA TGATTATCAA
TTGGATGTTG CAGACAGTGC AGACTACATC AATGCCACTA AGGTTATTGC TGCAGGCACC
GCAACGGGTA AAGGTCAACG AGTAGCGGTA TTAGATACAG GGGTTGACTA CACCCATAAA
GCACTCGGTG GCTCAGGCCT AGTCGCTGAT TATAATGCGG CTGTAGCTGC AAAATCAGAA
ATGCCGAATT GGCCGCAAGG TAAAATAATC GGCGGTTATG ACTTCATGAA TGATGATCCT
AACCCTATCG ATGTCAACAC CAACCACGGA ACACATGTTA GCCACTCTGT TGTAGGTATT
GCACCAGATG TTGAACTCTA TGTTTACTCT GTATGTAATT CAGGTTGTCC AGGTCTTGCG
CAATTAAATG CCTTAGAAGC TGCAATGGAT CCTAATGATG ACGGTGATAT TTCAGATCGT
GTTAATACTG TAAACATGTC GCTTGGTGGC GATTTTGGTG ACAGCAAGGG CGGTGCAGTT
CAAGAGCTCA TCGATGAAAT GGTTGCTCTA GGTGTAAACT TAGTTATTTC TGCAGGCAAT
GATGGCCCAA CTCCATTTGT AGTCGGTGGC CCTAGTACCT CTGATGGCGC TATTTCAGTT
GGTGCTATGA CTCACCCAAC GACTAAATCG GCAAAGATTG ATGCTGTAGC CGCAGGTGAA
GCCTTTGAAT CATTTGGAGC CAGTTTTAAC ACCAGCAACG TGTTCAGCTT TAATGACACC
ACTGCACCTT TAGTTGTACC AACTACAAAT CAAAATGGCT GTACAGCATT TGCTGATGAT
GTAGATTTTA CAGGCAAAGC TGTCATCATA GATCGCGGCA CATGTGGTTT TACAGTCAAA
GTGCTTAATG CCCAAAAGAA AGGTGCATCT TTTGTTATTG TAGCTAATAA CAAAGTTAAT
GATGGCGCAT TCTCAATGGG TGGCAGTGAT TCGGCCATCA CCATTCCTTC TGTAATGATT
TCTAAAGAAG ATGGCGATGC AATTAAAGCA GCATTAGCTT CTGGAAACGG TGCTTATTCC
GTAGTCTCAA AAGAAGTTGC TACTGCCGGT GCTATTGCAA CATTTACTTC TCGTGGACCG
TCAATTGCGG GTACTTTAAA GCCTGAAATC ACAGCTCCAG GCACGTCTAT CATGACAGCT
CACCCAGGTC TTGGTGAAGG CTTAACGCCT ATTAGTGGAA CGTCGTTTTC AAGCCCTATT
ACTGCGGGTG CTATGAGTAT TATCAAAGAA GCATTACCAA AACGTAATGC TCTTGAAATT
AAAGCAACCA TGATGAACTC TGCTAATTTA GATGTCACAG CAGAACCAAG AGGCTTAAAC
CCTGATGCAG AATTAGCACC AATCAGTTAT ATCGGTGCTG GTTTAGTTGA TGTAGAAAAA
GCAATCAACT TACCTGTTAT TGCATGGAAT AAAGATACAA AGCAAGCTGC ATTGGCTTTT
GGTTTAGTTT CTTTAACTGA AACAACCTCA ATAACCAAAA CCATCCAAGT GAAGAACTTT
TCTAAAGACG TTAAAACATA TTCACTTATG GCTGAACAGC GTTTCATGAA TGATATCGAG
TCTGGTGCGG TTTCTTTCGA AATGCCTACA AGCGTGACAG TCAATGCAGG TCAAACTAAA
TCTTTTGATG TAAAGGTCAC CATTAACCCA ACGAAGCTAC CAAAATGGTC GTTAACCTCA
TCATATGAAT TAGATGGCAC AGCTCAAGAA GCCTCTGATG CGCTGACTCT TTCTGAGTAC
GATGGTGCTA TCAAGTTTAT GGATGGTGAA ACACAAGCAC TTCATGTGGT TTATCATATT
TTACCAAGAG CGGCAGCTGC CGTTTCTGTT AAAACTGAGG TCACTGATAA AGGTGTTGTG
AGAACATTAA CTAATATTGG TTCAACATCA ATCACAGATC CATTTAGCGC TCCTCTGACT
GCTACCAGCC CTAAGAACAT GAATTTGCGT CATGACTTAT TGAATGCATC AAGTGAATTG
GCTTCTAGCT CATCATGTGA TGCTGGCATT GCCATTTACA ATACATTCCA AATGCGCGAT
CCCATTGTTC ATGGCTTAGT TGCCAGTTAT AACGTTGATT ATGACTTAGA CAATGATGGC
ACTTGGGATT ACACCTCTAA AACCGTCAAC CTCCAATGGT TTAACGATGC TTACCCTCGT
TCTTTATACG CTATGGTAAC AACCTATGGT ACTGAAAACG GAACTTTAGA ACCTGCATTC
CATATAACAG GTAATAACTT TCTTACTACC AAAGCTTGTT TTGAAGATAT GGGATTAGCT
GCAACCGACT TAGGTGCCAA AATTGGCGTC CGCTACCGTG TTGAAGAAAG CGATTGGGCG
CCGGTATCTA CAGGAACGGG TGATGAAGTC ACGACTTCGT TAACCTTAGC TGCACCTGAT
GCTTCTGCAA AATTAGTTAA GATCCCTGCT GCTGGGGTGA CTCCATCTGC GGTAGAGTCT
GCTGACGATG AAGAGGTCAC TGAACTTAAG CCTGGTGAAA GTGCCAAGTT AGTTACAACC
GTTGGCAAGA ACGCTATGGG ATACATGCTG CTCTCAGATA GTGGGGCTAT GTCAGTAGTA
GCCAATACTT CTGCAGCAGG CAACTCTGCG CCTACAGTTC AAGATCTCAC TTTATCTGTA
GACAAGGGAA CTGCAGCTAA CACAGTGTTA GGGCAAATTA TCGCAACAGA TCCTGATATG
CTGACTAGCC CCGTATCTGA ATTTATTGTC TTAAACTCCA ATTCAAGTAT GTTAGCAATT
AGTGCTAAGG GTGTAGTTAG CCTAAGTGAT ACTGCAGTGA TTAGCCAAGC AAGTGAAACA
CTCACGGCGC AAGTTGTTGC TGTAGACACT ATGGGTAACA GCTCAGCACC TGCGACAGTC
TCTGTAAATA TTAATAATCT TAAACCAACT GTGGCTCCTA CTGGTATGAC TGGTGAAGAG
GGTTCGGTTG TCATAGCGAG TGCAAATGCT CAAGATGCTG ACGGTGATAA ACTAACCTAT
AACTGGGTGC AAACTGGCGG TAAAACAGTC TCATTTGCAA ACGGTGCTAC ATCAAAAATT
AACTTTAAAG CACCAGCGGG TGATGGTGTC TATGAGTTTT CTGTGACAGC CTCTGATGGC
CGCCTAACAA GTGAGCCAGG CACAGCAACT ATTACTGTTA CTGCTGCTTC AAGCGGTGGT
TCTATGGGTT GGTTAACTAT GTTGTTACTA CCTCTAGCTG CATTGCGTCG TCGCAAGTCT
TAA
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| Protein sequence | MKTKLSLAVS AALISGACFA GTGDKYNTTN QSNDEYAGLQ VTKSEQVKKV ASAWMIKLNV
PSISQQHRTS NTDFSLASHN VQQSQQRVKS AIMQLDADIQ VVGQTSKLVN SILVKADKSQ
LTALLSHSDI ADILPIYDYQ LDVADSADYI NATKVIAAGT ATGKGQRVAV LDTGVDYTHK
ALGGSGLVAD YNAAVAAKSE MPNWPQGKII GGYDFMNDDP NPIDVNTNHG THVSHSVVGI
APDVELYVYS VCNSGCPGLA QLNALEAAMD PNDDGDISDR VNTVNMSLGG DFGDSKGGAV
QELIDEMVAL GVNLVISAGN DGPTPFVVGG PSTSDGAISV GAMTHPTTKS AKIDAVAAGE
AFESFGASFN TSNVFSFNDT TAPLVVPTTN QNGCTAFADD VDFTGKAVII DRGTCGFTVK
VLNAQKKGAS FVIVANNKVN DGAFSMGGSD SAITIPSVMI SKEDGDAIKA ALASGNGAYS
VVSKEVATAG AIATFTSRGP SIAGTLKPEI TAPGTSIMTA HPGLGEGLTP ISGTSFSSPI
TAGAMSIIKE ALPKRNALEI KATMMNSANL DVTAEPRGLN PDAELAPISY IGAGLVDVEK
AINLPVIAWN KDTKQAALAF GLVSLTETTS ITKTIQVKNF SKDVKTYSLM AEQRFMNDIE
SGAVSFEMPT SVTVNAGQTK SFDVKVTINP TKLPKWSLTS SYELDGTAQE ASDALTLSEY
DGAIKFMDGE TQALHVVYHI LPRAAAAVSV KTEVTDKGVV RTLTNIGSTS ITDPFSAPLT
ATSPKNMNLR HDLLNASSEL ASSSSCDAGI AIYNTFQMRD PIVHGLVASY NVDYDLDNDG
TWDYTSKTVN LQWFNDAYPR SLYAMVTTYG TENGTLEPAF HITGNNFLTT KACFEDMGLA
ATDLGAKIGV RYRVEESDWA PVSTGTGDEV TTSLTLAAPD ASAKLVKIPA AGVTPSAVES
ADDEEVTELK PGESAKLVTT VGKNAMGYML LSDSGAMSVV ANTSAAGNSA PTVQDLTLSV
DKGTAANTVL GQIIATDPDM LTSPVSEFIV LNSNSSMLAI SAKGVVSLSD TAVISQASET
LTAQVVAVDT MGNSSAPATV SVNINNLKPT VAPTGMTGEE GSVVIASANA QDADGDKLTY
NWVQTGGKTV SFANGATSKI NFKAPAGDGV YEFSVTASDG RLTSEPGTAT ITVTAASSGG
SMGWLTMLLL PLAALRRRKS
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