| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3047 |
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| Symbol | |
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| ID | 4019573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3657645 |
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| End bp | 3658637 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637957099 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_564048 |
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| Protein GI | 91794397 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA TAGGTTTTTT TAGCGCCAAG CATTACGACA TAGTGCATTT TTCTGCGATC
AATAAAGACT TTGGTGCCCA CATTGAATAT TTTGACTCTC GGATCTGCAT GCAAAATGCC
AAGCTTGCTC AAGGATTTGA AGTGGTGTGT GCTTTCGTTA ATGATTCTTT ATGTGAAGAA
GTGTTAATCG AGTTGGCTAA AGGCGGCACT AAAATTCTCG CCATGCGCTG TGCGGGGGTT
AACAATGTGG ATTTGCTTGC GGCACAGCGC TTAGGGATCA CTGTGGTTAA CGTGCCAGCC
TATTCTCCAG AGTCGGTTGC CGAACATAGC ATAGCCTTGA TGCTGACCCT AAATCGTAAG
ATCCATAAGG CCTATCATAG AACACGGGAT TCAAACTTCG ATTTAAACGG TTTAGTCGGC
TTTAATATGC AGGGCAAAAC TGTGGGCGTA ATAGGCACAG GGAAAATTGG CCTCGCCACC
ATTAAAATTT TGCTTGGCTT TGGCTGTAAG GTGCTGGCTT TTGATCCTTA TCCTAATCAA
GCCGTGATTG ATTTAGGTAT TAGCTATATC GAGCTCGACA GCCTCTATGC CCAGAGTGAT
ATTATCAGCC TGCATTGCCC TCAAACCAAA GATAATCATC ACTTACTCAA TAATAATAGC
TTTGCCAAAA TGAAGCCTGG CGTCATGATA ATTAATACCA GTCGCGGCGG ACTATTGAAT
GCTTTCGATG CCATGGAAGC CCTTAAAACA GGTAAAATTG GTGCCTTAGG GTTAGATGTT
TACGAAAATG AGAAAGGGCT ATTTTTTGAG GATAAGTCCA ATGAGATTAT GCAAGATGAT
GTATTTAGCC GTCTATCGGC TTGTCATAAT GTCATTTTTA CTGGCCATCA AGCATTTCTA
ACCGAAGAGG CGCTCAATGC TATTGCAGAG ACGACTTTGA CCAACATTCA AACACTGGCC
GCAGGGCAAG TGTGTGGTAA TGAGTTGCAC TAA
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| Protein sequence | MMKIGFFSAK HYDIVHFSAI NKDFGAHIEY FDSRICMQNA KLAQGFEVVC AFVNDSLCEE
VLIELAKGGT KILAMRCAGV NNVDLLAAQR LGITVVNVPA YSPESVAEHS IALMLTLNRK
IHKAYHRTRD SNFDLNGLVG FNMQGKTVGV IGTGKIGLAT IKILLGFGCK VLAFDPYPNQ
AVIDLGISYI ELDSLYAQSD IISLHCPQTK DNHHLLNNNS FAKMKPGVMI INTSRGGLLN
AFDAMEALKT GKIGALGLDV YENEKGLFFE DKSNEIMQDD VFSRLSACHN VIFTGHQAFL
TEEALNAIAE TTLTNIQTLA AGQVCGNELH
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