| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3026 |
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| Symbol | |
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| ID | 4019551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3633814 |
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| End bp | 3635304 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637957077 |
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| Product | DEAD/DEAH box helicase-like protein |
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| Protein accession | YP_564027 |
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| Protein GI | 91794376 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTT CCTCCCTAGG CCTCAGTGCC GCCCTGCTAA AAGCCATCGC TAAACAAGGC
TATGACACAC CAACAGCCAT TCAGGCCCAA GCTATTCCAG CTGTATTGGA AGGCAAAGAC
GTCATGGCTG CGGCCCAAAC AGGGACAGGG AAAACCGCTG GTTTTACATT ACCATTATTA
GAAATTTTGT CTAAAGGCAA ACCTGCACAA CGTGGCCAAG TGCGTGCCTT AGTGCTCACC
CCAACTCGTG AACTGGCAGC TCAAGTGGCC GACAGTGTTG AGACTTATGG TCACAACTTA
CCGCTTAAAT CTGCGGTCGT GTTTGGCGGC GTGTCCATAG TGCCGCAAAT TGCGGCGTTA
AAGCAGGGCG TGGATATTTT GGTGGCAACC CCAGGTCGAC TACTGGATTT GTGCAACCAG
AGGGCGCTCA GTTTTAGCAC CTTAGAAATT CTAGTGTTAG ATGAAGCCGA CCGCATGCTG
GACATGGGCT TCATTCGTGA TATCCGTAAA GTATTAGCCA TGCTGCCAAA GCAGCGTCAG
AACCTGATGT TCTCGGCCAC CTTCAGCGAT GACATTCGCG AGCTTGCCAA AGGGTTAGTG
AACAATCCGG TTGAGATTTC AGTTACGCCG CGCAACGCCA CCGCCAACAC TGTGACTCAG
TGGGTCACCC CAGTGGGCCA GAGCGACAAG ACCTCTGTGC TTATCGATTT GATTAAAGAC
AATAATTGGC AGCAAGTGTT AGTGTTTTCT CGCACTAAGC ACGGCGCCAA CCGTATTGCC
AAAAACCTTG AAGCCGCCAG CATCAAAGCC GCGGCCATTC ATGGCAATAA AAGCCAAGGC
GCGCGCACTA AAGCCCTTGC GGATTTTAAA GCCGGTAAAG TGCAAGTCAT GGTGGCCACA
GATATCGCCG CCCGCGGTAT CGATATCGAC CAATTACCAT TTGTGGTTAA CTTCGATTTA
CCTAACGTGT CAGAAGATTA TGTGCATCGT ATTGGCCGTA CCGGCCGCGC TGGAGCCAGT
GGACAAGCCG TGTCGTTAGT GGCCGATGAA GAAGTCAAAT TACTGCACGA CATCGAGCGC
TTGATTGGCC GAGTCATCGA CAGAAAAGCC ATTCCAGGGC ACGAGCCAAG ACACAGCTTG
CCCGAGCCAA ACCTTAAGGG CCGCACTGCA TCGAATCACG GCCATGGCGC ACGCAGCAGT
CAAGCCAAGA GCCAGCCACA GCACAAGCAG CCGAACCCTA ATCGCCCTAA GCATGCCCAG
CATGCCAATG ACCGTAAGGC CAACGACAGA GTCGCCCAAA GCATAGGCTT AGAAGAGAAG
CCTGCAAAGC GTCCACGCCG CGCCCCAAAA CCAGCTGGTG AAGCGGCACT TGGCGCAAAC
ACGCCTTCAC GCCCTACTCG TAGCCCAAGA CGCTCAGCCT CAAATGAAGG CCAGGCGGCT
AACGCCAATC CAAGCAAAGG CGCTACAAAC CCTTGGGGCA ACAGAGACTA A
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| Protein sequence | MSFSSLGLSA ALLKAIAKQG YDTPTAIQAQ AIPAVLEGKD VMAAAQTGTG KTAGFTLPLL
EILSKGKPAQ RGQVRALVLT PTRELAAQVA DSVETYGHNL PLKSAVVFGG VSIVPQIAAL
KQGVDILVAT PGRLLDLCNQ RALSFSTLEI LVLDEADRML DMGFIRDIRK VLAMLPKQRQ
NLMFSATFSD DIRELAKGLV NNPVEISVTP RNATANTVTQ WVTPVGQSDK TSVLIDLIKD
NNWQQVLVFS RTKHGANRIA KNLEAASIKA AAIHGNKSQG ARTKALADFK AGKVQVMVAT
DIAARGIDID QLPFVVNFDL PNVSEDYVHR IGRTGRAGAS GQAVSLVADE EVKLLHDIER
LIGRVIDRKA IPGHEPRHSL PEPNLKGRTA SNHGHGARSS QAKSQPQHKQ PNPNRPKHAQ
HANDRKANDR VAQSIGLEEK PAKRPRRAPK PAGEAALGAN TPSRPTRSPR RSASNEGQAA
NANPSKGATN PWGNRD
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