| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3013 |
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| Symbol | |
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| ID | 4019538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3618581 |
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| End bp | 3619450 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957064 |
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| Product | transcription activator, effector binding |
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| Protein accession | YP_564014 |
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| Protein GI | 91794363 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins
[COG3449] DNA gyrase inhibitor |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGA GTAAAAATCG TGGTCAGTTG AATAGAGTAA AAGAGGTGTG TAGCTATATT
GGTCAACATC TGGATGAGGA GCTTAACTTA ACCCATTTGA GCCAAGTTGG GCTATTGTCT
CGATTTCACT TTCATCGGTT ATTTTTAGCC GCCACAGGCA TGCAATTGAA CCGTTATATA
TTGCTTTTGC GACTTAAGCG GGCGTCATTT CGGTTAGCTT TCGAATCCAA ACGCAAGATC
CTCGATATTG GTATCGAGGC TGGATTTGAC AGCGCCGAAG CCTTTAGTCG TGCCTTTAAA
CGAACCTTTC AGCAAAGTCC TTCACAGTTT CGCAGCAACC CCGATTGGCC TCATTGGCAT
TCGGTGATGA CCTTAGTTAA TCCACCTCAA GGAGACATTA TTGTGGATGT GAAGCTTATT
GAACTACCTA TACAAAAAGT CGCTCAGTTA GAGCACAGCG GCGCCCCTGA AAAACTAATG
GAAACGGCTA AACAATTTAT TGAATGGCGC AAGACTACTG GGCTATCACC TGTGGCGATT
AGCCGCACGT ATGGCGTGCC TAATGGTGAT CCTAATACCA TGGCAGCTGA AGACTTCCGT
TTTCGATTTT GTGGTTCAGT CAATGAAGCT GTGCCTGACA ACGAGTACGG CGTCGTTACT
GGTACCCTTG CCGGAGGCTG CTATGCTGTC ATCCGCCATG AAGGCAGTCA CGATGCCATG
GAGTCGAGCA TTTATGGGTT CTTCCGAGAG TGGTTACCAC AAAGCGGCAA AGCTATGCGG
GATGAGCCGC TGTTTTTTCA TTATCTGAAT TTTATTCACC AGGTAGATGA ATGCGACTTG
CTCACGGATA TTTATCTGCC CCTTGAATAG
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| Protein sequence | MKQSKNRGQL NRVKEVCSYI GQHLDEELNL THLSQVGLLS RFHFHRLFLA ATGMQLNRYI
LLLRLKRASF RLAFESKRKI LDIGIEAGFD SAEAFSRAFK RTFQQSPSQF RSNPDWPHWH
SVMTLVNPPQ GDIIVDVKLI ELPIQKVAQL EHSGAPEKLM ETAKQFIEWR KTTGLSPVAI
SRTYGVPNGD PNTMAAEDFR FRFCGSVNEA VPDNEYGVVT GTLAGGCYAV IRHEGSHDAM
ESSIYGFFRE WLPQSGKAMR DEPLFFHYLN FIHQVDECDL LTDIYLPLE
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