| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2984 |
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| Symbol | |
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| ID | 4019509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3571927 |
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| End bp | 3572643 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637957035 |
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| Product | two-component response regulator |
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| Protein accession | YP_563985 |
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| Protein GI | 91794334 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAACC CGCATATTCT GATTGTTGAA GATGAAGCTG TCACCCGTAA TACATTAAGA
AGTATTTTTG AAGCCGAAGG CTATGTTGTT ACTGAAGCAA ATGACGGCGC AGAAATGCAC
AAAGCCATGC AAGATAATAA AATTAATCTT GTGGTTATGG ATATCAACCT GCCAGGTAAA
AATGGTCTGT TACTCGCTCG TGAACTGAGA GAGATTAACA ACATAGGCCT CATTTTCTTA
ACCGGTCGCG ACAATGAAGT CGATAAAATC TTAGGCCTTG AAATTGGTGC TGATGACTAC
ATCACAAAAC CATTCAACCC AAGGGAATTG ACTATTCGTG CCCGCAACTT GTTAACTCGT
GTTAACAGTG CCGCACAAGA AGTCGAAGAA AAAGGTTCAG TTGAGAACTA CCGCTTTAAT
GGCTGGAGTT TAGAAATCAA CAGTCGTTCA CTGGTTAATC CTAAAGGTGA ATCTTACAAA
CTGCCACGTA GCGAGTTCCG CGCTATGCTG CATTTTGTTG AAAACCCAGG GAAAATCCTT
ACTCGTGCCG ACTTGTTGAT GAAGATGACC GGCCGAGAGT TAAAAGCGCA TGACAGAACC
GTTGACGTGA CCATTCGCCG TATACGCAAG CATTTTGAAA GCTTAGTCGA TACGCCAGAG
ATCATTGCCA CCATTCACGG CGAAGGCTAT CGTTTTTGTG GCCAATTAGA CGCTTAA
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| Protein sequence | MQNPHILIVE DEAVTRNTLR SIFEAEGYVV TEANDGAEMH KAMQDNKINL VVMDINLPGK
NGLLLARELR EINNIGLIFL TGRDNEVDKI LGLEIGADDY ITKPFNPREL TIRARNLLTR
VNSAAQEVEE KGSVENYRFN GWSLEINSRS LVNPKGESYK LPRSEFRAML HFVENPGKIL
TRADLLMKMT GRELKAHDRT VDVTIRRIRK HFESLVDTPE IIATIHGEGY RFCGQLDA
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