| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2978 |
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| Symbol | |
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| ID | 4019503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3564540 |
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| End bp | 3566207 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637957029 |
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| Product | hypothetical protein |
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| Protein accession | YP_563979 |
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| Protein GI | 91794328 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | [TIGR01222] septum site-determining protein MinC |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGAGT CAAGCTTAGC GTCATTTAGC GCTGATAAGA ATCAAGTCGA ATTACGTATT
GTTCCAAGTA CTCACGGTCC TGTGAGTGAA GATGATATTA AGCAACTATT GACCCAAAAA
GACTTTGCTA TGTTATGTCC AATGCTGGCT AATATCGAAA AAGCCTGCAA AGAAGTTAAT
GCGCTCTGCA ATCAAGATGC GGGGAAACAT GAACTTTTTT TTATTATTGG TGAACGCCGT
GATGGCAAAG CCGAGGTGAC TGTCAGCGCC GATAAAATGG TTGCAAGTAT GAAAATAACA
GCCGCGTGGG GCGGCAAGGA AATCAGCTTA ACGGATGTGC TCAATTGCCT TAAGAGCAAC
AAAATAAAAA TGGGCTTAAG CAAGCCAAAA ATTCAAGCCC TTCTCAGTCA ATTAAACTTC
CTTCCACCCG GCGAAAGTAG CCAAAATGAT ATTGCCCAAG GTAAAGCTCC TATCCATGGC
ACCAATGCCA GGATTGAACG TAAAGTTTCC TTAGCCCGTG AACGTTTGCT TCAACCTCAA
GAACGAGAAG ATGGCACAGT GGACATGCGA AACCTTGGCG CAATGATCAT GGTAAAGCCT
AAAGACTTAC TTATGGAAAA AAAACCTGCC ACTACCGGAA CCCCAGGTTA CACAGTGCAT
GGTGATGTTA TTTTACAAAA GCCAGGTCAA GACAAACCCA TGAACCCTGG GGATGGCACG
GAACTTGACC CTAAGGATCC CTATCGGCTT ATTGCTAACG TTGCAGGCCA ACCGGTTGAG
ACTAAAACCG GCATGCAAGT TGATGATGTA TTGCAAATTA AAGATGTCGA CGTTCGCTAT
GGTAATGTCG ATTTCAAAGG CAGTATTTTA ATCAGTGGTG ATGTCCATGA AGGCATGGTG
GTCAAAGCCA GCGGTGATAT TACCGTTATG GGTTTTGTTG ACTCAGCCAC ATTACATGCT
GCCGGCGATG TGATTGTCAG CAAAGGCATT ATCGGCCGTC AAATCAAGGC CAATGAACTC
AGCACAAAAA TCACTGCTGA AGGGCAAATT TGTGCGCAAT TCGTACAATA CTCAGAGCTA
ACAGCCAAAG GCAACGTTTT GGTTACCAAG CAGCTGTTAC ACAGCAATAC CAGATCGGAT
TTAGTCATTA CAGTTAGCGA TCAAACGGCC CGACGGGGCG ATCTTATCGG CGGCCAAGCG
ACAGCAGGTC ATGGGATCCA TGCCGTTATT ATTGGTGCCA AAGTAGGCAC AAAAACCGAA
CTGTTTTGTG CCATGGATCA ATCCGAATTA AAAAATGATC TCAAGGCCAT AGATGAAAGC
GTTAAGTCTA TGGTGACAGC CGCCTTAGAA ATTGAAGGTC GACTCAACCG CTTACCACCA
AAAAATGAAT GGCAAAATGA CGCTGGCATG ATTGAACAAG TGAAGATGAT GCTGGATCAG
AAAAACCTCA TCATTGAAGA AAGATTTAAA GAAGAGACTG AATACGCCAG CTTACAGGCA
GAAGTCGAAA ATTATTACGA CAAATACTTT ATTAAAGCCG CCAAACAAAT TTTCAATAAT
GTCGACATTC GCATTGGTCC AGCATTCAAC CGTACTCAGA GAGAACACGG TCCCTGCACA
GTCAAAAACG TCAATCAGGA AGTGGCCTTT AACTACACAG GCCGCTAA
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| Protein sequence | MLESSLASFS ADKNQVELRI VPSTHGPVSE DDIKQLLTQK DFAMLCPMLA NIEKACKEVN
ALCNQDAGKH ELFFIIGERR DGKAEVTVSA DKMVASMKIT AAWGGKEISL TDVLNCLKSN
KIKMGLSKPK IQALLSQLNF LPPGESSQND IAQGKAPIHG TNARIERKVS LARERLLQPQ
EREDGTVDMR NLGAMIMVKP KDLLMEKKPA TTGTPGYTVH GDVILQKPGQ DKPMNPGDGT
ELDPKDPYRL IANVAGQPVE TKTGMQVDDV LQIKDVDVRY GNVDFKGSIL ISGDVHEGMV
VKASGDITVM GFVDSATLHA AGDVIVSKGI IGRQIKANEL STKITAEGQI CAQFVQYSEL
TAKGNVLVTK QLLHSNTRSD LVITVSDQTA RRGDLIGGQA TAGHGIHAVI IGAKVGTKTE
LFCAMDQSEL KNDLKAIDES VKSMVTAALE IEGRLNRLPP KNEWQNDAGM IEQVKMMLDQ
KNLIIEERFK EETEYASLQA EVENYYDKYF IKAAKQIFNN VDIRIGPAFN RTQREHGPCT
VKNVNQEVAF NYTGR
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