| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2962 |
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| Symbol | |
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| ID | 4019487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3545051 |
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| End bp | 3549604 |
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| Gene Length | 4554 bp |
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| Protein Length | 1517 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637957013 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_563963 |
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| Protein GI | 91794312 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGCA AAAAACAGCC CAAACACATG ACTCAAGTAC CAAGCCCAGA TCCACTTTTT
TTACAAGCTG AGCATCTGGC AAAAGATTTT TCTTTATTTC CTGCTCACAG CAAACAAAGT
TTGGCTGAAG AAATTAAAGG TTTGTTATCT GATGATGCTA TTCAAGTAAA CTTAAAAAGT
TTAGCTGCAT TAGATGTAGA CGGTTATGTC AATAAAGTGA TCCAACCGAC ACAAGATAAG
AGCCGACCAG GCGCTAAACG TATCATTGCC GATTTAAAAG GTAAGCTCAT AAGTGAAATC
CACCTAGGGC CTTTTTATCG TGCTGAAGTT GAGCTTAATT TCGGCTCTCG TACCCGCAGA
GTTGGCTTCA TTGCTCAAGA GCGTACCACT GCCAATGGTG CCTGGATGCC AGAGCATCAT
ATCGCCTGCT GTAAAGCGAT TCGTCACTTC GCAGAATTGT CTATGCCTAT AGTGTATCTT
ATTGATACCC CAGGGGCGGA CGCGGGTGAG ATAGCGAACA GTCAAAATCA GGCTCATAGT
ATTTCTAAGG CGATCGCAGA ATCTGCCAAC GTCGACGTGC CAACCGTGGG TATCGTTATC
GGTGCTGGCT ATTCTGGTGG CGCCATCCCT TTAGCGGCGG CAAACATTCT ATTGTCTTTA
CGTGACGGTA TTTTTAATAC CATCCAGCCT CAGGGATTAC AGAGCATCGC ACGTAAATAC
AACCTGTCTT GGCAGGAATG CGCCAAATCT GTAGGCGTAT CTCCAGAGGA ACTCTACCAC
TCAGGTTGCA TCGACGGCAT TGTTGATTTC TCGCCATCTG ATCGCGATGA ACGTCAGCAC
AATCTGCGCC GTGCCATTGT CAGCGGTATT GAAGCCGTTG AAAAGGCAGC TGTCAATTTT
GTTCGAGAGT CTACTGATTT ACGTGAACAT TATGATCGCA GCTTAGAGCG CTTCTTAAAT
CCTTCTAAAG GATTATTAAA TCTAGAGAGT AACTCTGGTT TAGCGGTTGC CGATAGCCCT
ACTGCACACC ATAACTTATT CGGCAGCGCC TACCGTTATT TACGTTATTT AACCCTAAGA
AGTCGTATCC ATTCTATTTC TCAAGAGCAG TATGGTCGTC TTTCAAAGGT AAGTGTGCCT
GAAGGTGATT TGCTTGAGCG TATTAAGCAA GAGCAGGAAC GCGTGTTCCA TGCATGGCTT
TCAAATCCAG ATAAACTCGT TTATGACGAG GAATTAAATA AACTTTGGGT TCATTTTGCT
GCCAAGCGAA GTGAAATTTC TACCGAGCGC AATGTGATCA CTCGGTTTAT TTTAGGTGAA
CCTAAAGAGA ATTATAAAAA AGCCCGTAAA GCACTGTTAT TTAATGTGAG TTGGTCTCTT
TATCACAGAT GGAAGAGCAA CGCAGGCAAT AACTTTAAAG GCCTGATTAA GCATCTTGAG
TCATTACCCA GCGAGAAAAC AAAAGCGCCT TGGCCTGAGC TGAATCAGCT CACAGTGCTT
GATGTGATTG TGAATGATGA ATTGCGTGAA GACTTTATTT GGCAATGCCA CAATATCCTT
ATCTTCAACG AATTATATGA TGGTGTAGTG GCTAATTTAG CCTCGATATC TAAAGAAGCC
ATGATGGCCA AAAGCCTGTC CCGTGCTTCG GTTGATAAAC TGCTGCACAA ATCTATCGAT
AATGCATTAT CCACTCACAA ACAGGCGGGA GATAAGAGCA AGTTCTACAA GTGGCTTAAG
TATTTTATGT CACAGTCGAA CCGTGCCGAT TTATTAACCC GTGTTGAACA GTGGAAGAGC
GTGGGTTTCC CACAGTTAAA CGATAGTTTA TTCGTCGTGT TAACGTATTT CTTTGAGCGT
TTATTACCCG AGTATTTTGA CAGCGAAGAT GATCACGACA AGTACACTGG CACGATTAAT
CCAGTACGTA TTGGTCGTCG TAAGGATTTC TGGAACCGTT TAACCATGGG TTATCAAGAT
TTGTTGATCC AAAAGGTGTT GCGTGACGAG AAGAAAAAAG GCGCCATGGG CTGGGAGAAT
ATTATTGCCA AATTCTTTAC TCATTTCGAT GAGATTGATG GCGATAAGAT GTCGGCTAAT
TTACTGAACT TCCCTGGTTT CCGTTTATCA ATTGAAGATG CAATAGACAA GAAAATCCGT
CCTTGTGGCC TTATCACAGG ACTTGCTGAC TTTACTCATG AAGGCAACAA GTTACGTGTG
GGCTTGGCAG TGTCTAATAC GGCCTTCCAG GCGGGTGCGT TCGATATGGC CAGCGCTGAG
AAGTTCAGTG CGCTATTAAT TGAATGTGCT AAGCGCAGGC TTCCTGTGAT TTGTTTTATC
AGCTCAGGTG GTATGCAGAC CAAAGAAGGT GCCGCAGCGT TATTCTCTAT GGCTGTAGTG
AATGATCGCA TTACCCGTTT CATTCGTGAT AATGAATTAC CCGTGTTGAT GTTTGGCTTT
GGTGACTGTA CCGGTGGTGC ACAGGCAAGT TTTGTTACTC ATCCATTAGT GCAAACCTAT
TATTTGTCAG GCACAAATAT GCCATTTGCC GGCCAAATGG TAGTGCCAGC CTATTTACCT
TCGACGGCGA CCTTGTCTAA CTACTTGTCT AAAGTACCGG GAGCCATGGC GGGTCTTGTG
CTGAATCCAT TTAGCGATAA CTTAGATTCA TTGCTCGCGG GTATTGATCC ATTAATGCCG
ATTTCTAACC TTAAAGTTGA GGATGTGATT GCTAAATCCT TATCTAGCTT AGCGGCTGAA
GTGGTTGAAG AAACTGATGA GATAGTGCAA AGCGACCCAC GCAAGTTGAT GAAGCCGATT
AAAAAGGTGT TGATCCACGC CCGTGGCTGT ACAGCAGTTA AACTTATCCG TAAGGCCCAT
GATAACGGTA TCAATGTGGT ATTGGTGGCC TCAGATCCAG ATATGACAGC CGTGCCAGCC
GATATGCTTA AAGAAGGCGA TAAGCTGGTA TGTCTTGGAG GTAACACCTC AGACGAGAGT
TATCTAAACG CTTATTCAGT CCTCAAAGTG GCCGAATATG AAGAGGTTGA TGCACTTCAC
CCAGGTATTG GTTTCTTATC AGAAAGCCCA CAATTTGCGG CGTTATGCGT CAATAATGGT
GTGAATTTCG TTGGACCAAG CGTGCACTCG ATGACGACCA TGGGTAACAA GTCCAATGCG
ATTAAAACCT CGCAAGAGCA AAATGTGCCG GTAGTGCCAG GATCTCATGG CATTTTAACT
AATGCTGAGC AAGCGGTTAA TGTGGCAACA GAAATCGGCT ACCCCGTGTT ACTTAAAGCG
GTGCAAGGTG GTGGCGGTAA AGGTATTCAA GTCGTTAAGC GTCCTGAAGA CATGATAGGC
CTATTCCAAA AGACGGCCAC CGAAGCGGCT GCCGCATTTG GTAATGGCGA CTTGTACTTA
GAAAAGTACG TGACATCACT TCGTCATATC GAAGTGCAGT TACTGCGTGA TAAGTTTGGC
AATACTAAAG TGCTGGGTAT TCGTGATTGC TCTGTGCAGC GAAATAACCA GAAAGTCATT
GAAGAGTCTG GTTCTACCAT GCTGCCCGAA GCGCTTAAGC AGCAAGTGCT CGAATATACC
CGTGCTCTTG GTGATGCCAC CGATTACATG GGGGCTGGTA CCGTTGAGTT TATCTATAAC
TTAGATGCCA ATGAAGTGTA CTTCATGGAA ATGAACACTC GCTTGCAAGT TGAGCATCCA
GTAACAGAAG CGACATCGGG TATCGATATC GTGAGTGCTC AGTTTGACAT TGCAGCGGGT
CGCTCAATTG AGAAGCTTGA ACCTGTCGAG CAAGGTTATG CGATGGAAGT GCGAGTGACT
GCTGAAAAAG CGGCCCTCGA TAGTCATGGC ATACTGCAGC TAATCCCCAA CCCTGGTAAA
ATTTCTGAGT GTATTTTACC AGAACGTGAT GATGTGGAAA TTATCTCTAT CGCAGATTCT
GGCAAAGAAG TCTCGCCATA TTATGACAGC TTAATCGCAC AGATAATCAT ACGTGGCAAA
GATAGGCCTG ATGTCGTCAA GAAGATGTAT GACTATTTAG ATAGTGTTGT TATTCGTGGT
ATTGCCACCA ACATTCCATT ATTGAAGCTG ATCTTAAGTG ATGCCACATT CAATGAAGGC
GTGTATGACA CTAACTATTT ACCGCGCTTA ATGGCTGAAC TGGATATCCC AGCTCTTATT
GCCGAAATGG AAGCGGCAGC AGACACTGAA GCTGTGGATA CTGAATCCTT ACGCGTTGGT
GAGAGTAATG AGTTGAAAGT ATTGGCACAA GGTGCAGGCA TTTTCTACAC CTCTCCAGCA
CCGGGTGAAG CGGACTTCGT TAAAGAAGGC GATATAGTCA CAGTAGAGCA GACATTGGCG
TTAACAGAAG CTATGAAGAT GTTCTCTCAG GTGAACTTAG CAGGCTTTAA CAGACAGAGC
GCGGTACTTT ACCCTGAAGA TCAAAAGTAC CGTATTGAGC GTATTCTCAA TAGTAACGGT
CAGCAGGTCT CACAAGGCGA TTTATTGTTT GTTATTTCGC CGGTAGAAAA CTAA
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| Protein sequence | MTSKKQPKHM TQVPSPDPLF LQAEHLAKDF SLFPAHSKQS LAEEIKGLLS DDAIQVNLKS
LAALDVDGYV NKVIQPTQDK SRPGAKRIIA DLKGKLISEI HLGPFYRAEV ELNFGSRTRR
VGFIAQERTT ANGAWMPEHH IACCKAIRHF AELSMPIVYL IDTPGADAGE IANSQNQAHS
ISKAIAESAN VDVPTVGIVI GAGYSGGAIP LAAANILLSL RDGIFNTIQP QGLQSIARKY
NLSWQECAKS VGVSPEELYH SGCIDGIVDF SPSDRDERQH NLRRAIVSGI EAVEKAAVNF
VRESTDLREH YDRSLERFLN PSKGLLNLES NSGLAVADSP TAHHNLFGSA YRYLRYLTLR
SRIHSISQEQ YGRLSKVSVP EGDLLERIKQ EQERVFHAWL SNPDKLVYDE ELNKLWVHFA
AKRSEISTER NVITRFILGE PKENYKKARK ALLFNVSWSL YHRWKSNAGN NFKGLIKHLE
SLPSEKTKAP WPELNQLTVL DVIVNDELRE DFIWQCHNIL IFNELYDGVV ANLASISKEA
MMAKSLSRAS VDKLLHKSID NALSTHKQAG DKSKFYKWLK YFMSQSNRAD LLTRVEQWKS
VGFPQLNDSL FVVLTYFFER LLPEYFDSED DHDKYTGTIN PVRIGRRKDF WNRLTMGYQD
LLIQKVLRDE KKKGAMGWEN IIAKFFTHFD EIDGDKMSAN LLNFPGFRLS IEDAIDKKIR
PCGLITGLAD FTHEGNKLRV GLAVSNTAFQ AGAFDMASAE KFSALLIECA KRRLPVICFI
SSGGMQTKEG AAALFSMAVV NDRITRFIRD NELPVLMFGF GDCTGGAQAS FVTHPLVQTY
YLSGTNMPFA GQMVVPAYLP STATLSNYLS KVPGAMAGLV LNPFSDNLDS LLAGIDPLMP
ISNLKVEDVI AKSLSSLAAE VVEETDEIVQ SDPRKLMKPI KKVLIHARGC TAVKLIRKAH
DNGINVVLVA SDPDMTAVPA DMLKEGDKLV CLGGNTSDES YLNAYSVLKV AEYEEVDALH
PGIGFLSESP QFAALCVNNG VNFVGPSVHS MTTMGNKSNA IKTSQEQNVP VVPGSHGILT
NAEQAVNVAT EIGYPVLLKA VQGGGGKGIQ VVKRPEDMIG LFQKTATEAA AAFGNGDLYL
EKYVTSLRHI EVQLLRDKFG NTKVLGIRDC SVQRNNQKVI EESGSTMLPE ALKQQVLEYT
RALGDATDYM GAGTVEFIYN LDANEVYFME MNTRLQVEHP VTEATSGIDI VSAQFDIAAG
RSIEKLEPVE QGYAMEVRVT AEKAALDSHG ILQLIPNPGK ISECILPERD DVEIISIADS
GKEVSPYYDS LIAQIIIRGK DRPDVVKKMY DYLDSVVIRG IATNIPLLKL ILSDATFNEG
VYDTNYLPRL MAELDIPALI AEMEAAADTE AVDTESLRVG ESNELKVLAQ GAGIFYTSPA
PGEADFVKEG DIVTVEQTLA LTEAMKMFSQ VNLAGFNRQS AVLYPEDQKY RIERILNSNG
QQVSQGDLLF VISPVEN
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