| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2956 |
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| Symbol | |
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| ID | 4019481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3536804 |
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| End bp | 3537760 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637957007 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_563957 |
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| Protein GI | 91794306 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGTTT CCACTCAGTC TATGACTGAT TTTTATCCCG TATCCGAAAT CAATGCCGCA
CGCTTATCCC ACTTCGGAAT GATTGAAATC ACAGGTGAAC AGGCCAAAAC CTTTATCAAT
GGTCAAGTCA CTACCGATAT AATCAGCATG ACAGACGAGG AATGGCGCTG GGGAGCTCAC
TGCGACCCTA AAGGTAAGAT GATAGCCAGT TTTAGGATTT TTCTCCTAGG AGAGCGCTTA
TTGATGCTTA TGCCTAAGTC GACACTAGCC TTAGACTTAG CACAATTAAA AAAATACGCC
GTATTTAGCA AGGCTGAACT CACAGATGTA AGTGATAGCT GGGCTATTTT AGGTCTTTGG
GGGGAAAAAT CAGTTGATCT GATGACTCAG CACTTTGGTG AACTCACCCA AGGGTTAACC
GCCACAGAGC AAGGCGCCAT CTTAAAGGAC AATTTTGGTT TTATGGCTAT TCTGCCCCAA
GAGCAGGCTA ACATCTTTAT CGAGCAGGCA AAGCTTGAGC TTGTGGCTCA TAAGGCATGG
CAAGCATTAG AAATCGCAGC TGGCTATCCC AACATTGACA GTCAACACAG TGGTCAATAC
GTACCGCAAA TGTGTAATCT TCAGGCCGTC AATGGCATTA GCTTCACCAA AGGCTGCTAC
ATGGGCCAAG AGACCATTGC TAGGATGAAA TACCGTGGCG GCAATAAACG CGCCCTATAT
ATACTTGAAG GCACTACTCA GCGAACCCTG AGCACTGAGA GCCAAGTCGA GATCCAACTT
GAAGGCGGCT ACCGCAAAGT CGGTAATGTC ATCGAAGTGG TGCAGGAAGG TGAAAGAGTA
TTAATGACCG CTGTGCTCGC TAACGATACT GAAGCAGATG CCGTGCTGCG AATGGCTGAA
GATGAAAGCT CAAGCTTAGC CATCAAAGCC CTGCCTTACT CTTTGACCGA GGAATAG
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| Protein sequence | MSVSTQSMTD FYPVSEINAA RLSHFGMIEI TGEQAKTFIN GQVTTDIISM TDEEWRWGAH
CDPKGKMIAS FRIFLLGERL LMLMPKSTLA LDLAQLKKYA VFSKAELTDV SDSWAILGLW
GEKSVDLMTQ HFGELTQGLT ATEQGAILKD NFGFMAILPQ EQANIFIEQA KLELVAHKAW
QALEIAAGYP NIDSQHSGQY VPQMCNLQAV NGISFTKGCY MGQETIARMK YRGGNKRALY
ILEGTTQRTL STESQVEIQL EGGYRKVGNV IEVVQEGERV LMTAVLANDT EADAVLRMAE
DESSSLAIKA LPYSLTEE
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