| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2949 |
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| Symbol | |
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| ID | 4019474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3526639 |
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| End bp | 3528051 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637957000 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_563950 |
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| Protein GI | 91794299 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTGA GTAACTCAGA CAGCCCAATA GTCGCTAACA CGGCGTTTTC ATCGCTTTCC
CTTAAAACTG AACTGCTTGA GAACCTCAAG ACCATGGGTT ATGAATCCAT GACTCAAATC
CAAGCTCAGA GCTTACCGCC AATTTTGGCC GGTGATGATG TGATTGGCCA AGGCAAAACC
GGCTCGGGTA AGACTGCCGC TTTCGGCTTA GGTTTGTTGA ATAAATTGGA TGTGAAGCGT
TTTCGCATTC AGACCTTGGT CATGTGCCCA ACGCGTGAGT TGGCCGACCA AGTCGCCAAG
GAGATCCGCA CCTTGGCTCG CGGCATTCAC AATATCAAGG TATTAACCTT GTGTGGCGGC
GTCCCTATGG GGCCACAAGT GGGCTCCCTT GAACATGGTG CCCATATTAT TGTTGGCACT
CCAGGGCGCA TAATCGATCA TTTAGATCGC AACCGTTTAG ATTTAAGCAA TGTGAACATG
CTAGTGCTCG ATGAAGCGGA TCGCATGCTA GAAATGGGCT TTCAAGATCA CATAGATGCC
ATTATTGAGC AAACTCCCCG TGAGCGTCAG ACGCTGTTAT TCAGCGCCAC CTTCCCAGAT
CAAATTAAAT CCATTGCCGA TGAGATAATG TACAAGCCTG TGATGGTCAA AGTCGAGTCG
ACCCATGACG CCATCAGCAT AGAACAACAT TTCTATCAGC TTGAAGACAA CAAATCACGC
CTAGAAGCGC TGCGTTTATT GCTGCTCAGT GAGCAACCTG AAAGTGCGGT GGTATTTTGC
AATACCAAAC GTGAGACTCA GCAGGTGGCT GATGAATTAG CCGAGTTTGG CTTTAGTGTG
CTGGCACTGC ATGGGGATCT GGAGCAAAGG GATCGCGATC AAATGTTACT GCAATTTGCC
AACCAGAGCG CACGTATTCT GGTGGCCACC GATGTGGCGG CTCGCGGCTT AGATATCGAT
GCCTTAGATG CGGTATTTAA CTTCCACCTA GCCTATGATG CCGAAGTGCA TCTTCACCGC
ATTGGCCGTA CAGGCCGTGC TGGCAGTACC GGCGCCGCCT ACAGTTTTAT CGGGCATGAT
GACGGCTATA AGGTCGCCAT GATTGAAGAA ATGTTAAATA TTGAAATAGT CACCGAAGCC
TTGCCAGGCT TGAACGTGCT AAATAAAACC CCGCTGGCGG CCAACATGGT GACCATTCAA
ATTGAAGGCG GCAAGAAGCA GAAAATTCGC CCTGGCGACA TAGTCGGTGC CCTTACTGGT
GATAACGGGT TAGATGCCAA CGATATCGGT AAAATCAAGG TAACGGATAT TCGCGCCTAT
GTGGCAGTAA AGCGCAATGT GTCTAATCAA GCGCTGAATA AATTGAACAA AGGTAAGCTT
AAGGGCCGCA GCTACCGCGC CTGGCTTTTA TAA
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| Protein sequence | MTLSNSDSPI VANTAFSSLS LKTELLENLK TMGYESMTQI QAQSLPPILA GDDVIGQGKT
GSGKTAAFGL GLLNKLDVKR FRIQTLVMCP TRELADQVAK EIRTLARGIH NIKVLTLCGG
VPMGPQVGSL EHGAHIIVGT PGRIIDHLDR NRLDLSNVNM LVLDEADRML EMGFQDHIDA
IIEQTPRERQ TLLFSATFPD QIKSIADEIM YKPVMVKVES THDAISIEQH FYQLEDNKSR
LEALRLLLLS EQPESAVVFC NTKRETQQVA DELAEFGFSV LALHGDLEQR DRDQMLLQFA
NQSARILVAT DVAARGLDID ALDAVFNFHL AYDAEVHLHR IGRTGRAGST GAAYSFIGHD
DGYKVAMIEE MLNIEIVTEA LPGLNVLNKT PLAANMVTIQ IEGGKKQKIR PGDIVGALTG
DNGLDANDIG KIKVTDIRAY VAVKRNVSNQ ALNKLNKGKL KGRSYRAWLL
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