Gene Sden_2944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2944 
Symbol 
ID4019469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp3520217 
End bp3520891 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content47% 
IMG OID637956995 
Producthypothetical protein 
Protein accessionYP_563945 
Protein GI91794294 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3531] Predicted protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATAA ACTCACTAGG ATCGGCGCAT CTGTCAGCCC ACAAGAATTC ACCCATGAAT 
ACTGAACTTT ATTTTATCTA CGATTCCCAC TGCCCTTGGA GCTATGCCGC CACCCCTTTA 
GTGAACGCAT TACAAGCAGC CTACCCCGAA ATGAAGGTTA ACTTGTTGCA CAGCGCCCAT 
TACATAGGCA AAGACAGTGC AGGTGAAGAG CAGATGCAGG CGGCTGCGAG AATAAGCGGA 
CTTAAATTTG GTCGCGATCA CATTCGCTAC GCCAACAGCC CTAAAAGCTC GATAAAAACC 
GCAAACTTTA TGGCATGGTT ACAGGACAAG CAGGCCGATA AGCAATTGGC CGTGCTCAAT 
GCATTGCAAA GAGCCCATTT CATCGAAGGT AGCCCACTGG ACAATAAACA CGATTTCACT 
GCCATAGTGG AAACCTTTAA GCTGTCACCC TCCAATAAAG TGTTTAAAGA CGAGCTCAGC 
ATGGACGCGG AATACGCACT AGACGGCATT GAAGAAATTC AACAGGTGAT AGGCACCACA 
GGCTTTCCTG TGCTAGTGAT GACCTTAGAC GATAACGCCA TCTTTATCGA CCACTCAAAA 
TACTTAAGCA GTCCTCATGC CGTCGTCGCT GCGGTTGAAA AAGAAATTGC CGTATTGAAA 
TTAGCCAAAG AATAA
 
Protein sequence
MPINSLGSAH LSAHKNSPMN TELYFIYDSH CPWSYAATPL VNALQAAYPE MKVNLLHSAH 
YIGKDSAGEE QMQAAARISG LKFGRDHIRY ANSPKSSIKT ANFMAWLQDK QADKQLAVLN 
ALQRAHFIEG SPLDNKHDFT AIVETFKLSP SNKVFKDELS MDAEYALDGI EEIQQVIGTT 
GFPVLVMTLD DNAIFIDHSK YLSSPHAVVA AVEKEIAVLK LAKE