| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2940 |
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| Symbol | |
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| ID | 4019465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3514335 |
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| End bp | 3516467 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956991 |
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| Product | prolyl oligopeptidase |
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| Protein accession | YP_563941 |
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| Protein GI | 91794290 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1505] Serine proteases of the peptidase family S9A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.029506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAG CACTCGTTTC ATTGTGCGTC TTAAGCGCTA TCACAGCAGG CCAGGCATTG
GCAGAACCCG CATCAGAGCA AAAAGCATCA GCAAAAAACG CAAAAACTGC TGTGCAAGCA
GATAAATTCC TATGGCTTGA AGAGGTGGAA GGCACTAAGC CCCTCGCCTG GGTTAAGGAT
AAAAACGCTC ACAGCGCCAC TAGCATTAAG TCTTACCCAG GTTTTGATAC CTTAGTGAAT
AACTCACTGG CCATCCTTAA CAGCAAAGAC AGGATCCCCT ATGCCGAACG CAAGGGTGAG
TACCTGTACA ACTTTTGGAA AGATGAAACC CATGTTCGCG GCATTTATCG CCGTACTAGC
CTCGCGGAAT ATGTCAAAGA TGAACCTAAG TGGGAAACCG TATTAGATAT AGACGCCATC
GCCAAGGCGG ATGATGTCAG CTGGGTCTAT AAGGACATCA ATTGCTTAGC GCCTAAAAAC
GACTTATGTC TCGTATCATT ATCGCGCGGC GGCGCAGATG CCGTAGAAGT GCGAGAATTT
AATCTAACCA CTAAAAGCTT TGTTAAACAG GGTTACCGCT TACCAGAAGC AAAATCGGAT
CTCACCTGGT TAACTCAAGA TCAAGTGTTA GTGGCCACCG ACTTTGGCGG CGAACAGGGC
ATGACAGATT CGGGCTACCC CAGCGTAGTC AAATTGTGGC AGCGTGGTGA CAGCTTAGAT
AAGGCCAAGT TTATCTATCA AGCGGATAAA AGCTCAGTGG CCGCGGCGGC GCAAGTCCTC
GATGATGGCC AATCAAAAGT GGTGCTTATC GGTGACTACC TCACCTTCTA TACTAACAAG
GTTTTTGTCT ACGCCGACGA TAAACTGACC AAGCTAAATA TCCCTCAAGA TGCTGATATT
AAAGGTTACT TTAAAGGCAA CATCTATATT GAACTTAAGA GCGTCTTAAA CACAGATAAA
CAGCAATTTG TCCAAGGCGC AGTGCTCTAT GCCCCAGTTG ATTCGCTGAT GAGTGATAAA
CCTGAATACC AACAGCTGAC AGCCCCAGAT GCGCACTCAT CCATAGCACA AGTGGCATTT
AGCAAAAATG CGGTATACGT TAACCTGCTA GAAGATGTGA AAAGTAAACT GGTTCGTTTT
GAGCCAAAAG ATGATAACAA CTGGACACAA ACGACCGTAC CATTCGATGC CAACGGCAGT
CTGACCCTAT TTGACATACA GCAAGACAGC GACGATTTCT TCGTCGATTA CAACAGTTTC
CTCGAGCCGT CTAGCTTCTA TCAAGTGAAA GGGGCCGCTC TTGCTATCAA TAAACTAAAG
TCATTACCAC AGCAATTTGC CGCGGATAAA TTTGTCACTA AGCAGTACTT CGCCACCTCA
AAAGATGGCA CTAAAGTGCC CTATTTTGTG GTGATGGACA AAAATCTTAA GTTTAATGGT
AAAAACCCAA CTTTGTTATA CGGTTATGGT GGATTTGAAG TTTCACTAAA GCCTAAATAT
TCCGCCGATA TGGGTAAAAA TTGGTTAGAA CAGGGCGGCG TATACGTGCT TTCTAACATA
CGCGGTGGCG GTGAATACGG CCCAGCTTGG CACCAAGCGG CCCTAAAGCA CAATCGTCAC
AAGGCTTATG AGGATTTTGA AGCGGTAGCG GAAGATCTTA TCAGCCGAAA AATTACTTCA
AGCCCGCATT TAGGCATTCA AGGCGGCAGC AATGGCGGCC TACTTATGGG GGCAGCCCTG
ACTCGCCGTC CAGAACTATA CAATGCCGTC GTTTGCCAAG TGCCCTTATT GGATATGCAG
CGCTTCAGTC AGCTATTGGC AGGCGCCAGC TGGATGGGTG AATACGGTAA TCCAGAAGTG
GCTGAAGATT GGGCCTACAT CAAGACCTAT TCGCCTTACC ATAACTTAGA TAAAGCTAAG
CAATACCCTA AAGCTTTCTT TACCACCTCA ACCCGAGATG ACAGAGTCCA CCCCGCGCAC
GCCCGTAAAA TGGTCGCCAA GATGGAGTCC ATGGGCATTG ATGTACTCTA TTATGAAAAC
ATGGAAGGGG GTCATTCTGG CACCGCTGAC AACCAGCAAA AAGCCGAGCT TACCAGCCTA
GTGTACGCTT ACTTGTTGCA GCAGTTAAAA TAA
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| Protein sequence | MNKALVSLCV LSAITAGQAL AEPASEQKAS AKNAKTAVQA DKFLWLEEVE GTKPLAWVKD
KNAHSATSIK SYPGFDTLVN NSLAILNSKD RIPYAERKGE YLYNFWKDET HVRGIYRRTS
LAEYVKDEPK WETVLDIDAI AKADDVSWVY KDINCLAPKN DLCLVSLSRG GADAVEVREF
NLTTKSFVKQ GYRLPEAKSD LTWLTQDQVL VATDFGGEQG MTDSGYPSVV KLWQRGDSLD
KAKFIYQADK SSVAAAAQVL DDGQSKVVLI GDYLTFYTNK VFVYADDKLT KLNIPQDADI
KGYFKGNIYI ELKSVLNTDK QQFVQGAVLY APVDSLMSDK PEYQQLTAPD AHSSIAQVAF
SKNAVYVNLL EDVKSKLVRF EPKDDNNWTQ TTVPFDANGS LTLFDIQQDS DDFFVDYNSF
LEPSSFYQVK GAALAINKLK SLPQQFAADK FVTKQYFATS KDGTKVPYFV VMDKNLKFNG
KNPTLLYGYG GFEVSLKPKY SADMGKNWLE QGGVYVLSNI RGGGEYGPAW HQAALKHNRH
KAYEDFEAVA EDLISRKITS SPHLGIQGGS NGGLLMGAAL TRRPELYNAV VCQVPLLDMQ
RFSQLLAGAS WMGEYGNPEV AEDWAYIKTY SPYHNLDKAK QYPKAFFTTS TRDDRVHPAH
ARKMVAKMES MGIDVLYYEN MEGGHSGTAD NQQKAELTSL VYAYLLQQLK
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