| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2936 |
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| Symbol | |
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| ID | 4019461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3506867 |
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| End bp | 3508648 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956987 |
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| Product | ABC transporter, ATP-binding/permease protein |
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| Protein accession | YP_563937 |
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| Protein GI | 91794286 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACACCT CAAAGTCTGT TGCAGTTATC CCATGGTTAG CGGGATTTTT ACGCCCTTAT
CGTTGGCGCG TCGTGGCCGC CATAGTGTTT TTATTCATAG GCTCATTGGC CTGGTTATCT
TTAGGCCAAG GCGTGCGGCT GATGGTGGAT GAAGGCTTTA TGGCCGATAA TGCTGGCCGT
TTAAATGAAA TCATGGTGTT TATTTTACTG ATCACGTTTG TCAGTGGTGC AGCGGTGTTT
TTCCGTTTTT ATTTAATGAC TTGGCTTGGA GAGCGGGTCA GCGCCGATAT TCGCTTAACC
GTTTATCGGC ATTTATTGTC ATTATCGCCT AACTTTTTTG CATCACAGCG AACCGGGGAG
GTTATCTCGC GCTTTACCGC CGATACTACT TTACTCCAAA GCGTGGTGGG GGCCAGTCTA
TCCATGGCGC TGCGCTCTTG CGTCACGGTA ATTGGCGGCA TAGTGATGAT GGGCTTTACC
AGTGTAAAAC TCACCTTGCT GGTGTTGCTG GCAGTGCCAT TAGTATTAGC GCCTGTGGCC
ATATTAGGTA AAAAAGTACG TGAGTTATCC CGTAAAAGCC AAGATAAAGT GGGGGATCTG
GGGGCTTATA TCGATGAAAC CTTACATGAA ATTCACACAG TGCAGGCCTA CACCCACGAA
GATAAAGACA GGCAATTATT TTCTGAGCGA GTCGAAGCTG TGATGCTGGT GGCCAAAGCC
AGAATTGGCT ATCGGTCGTT ATTGATATCC TCTGTGATGT TTTTGAGCAT AGGCGCCATA
GCCTGCGTGA CTTGGATTGG TGCAAAAGAT GTGGTCAGCG GCGCTATCAC GGGCGGCGAG
CTGTCGGCCT TTATGTTCTA TGCGGTTATG GTTGCCGGCG CCGTGGCCAC CATCAGTGAA
GTCTTCAGTG AAATTCAGCG GGCATCCGGC GCCGCCGAGC GTTTAATTGA GCTTGCCAAT
ACCCCAGTGG ATTTACCAGA ACTTGAAACC CCTAAACACC TACCGAGTAA AACCGAGCTT
AAATTAAGTG GTGCACTCAG CCTTGAAAAT GTGCACTTTT CCTACCCATC AAGCCCAGAA
CAACAAGCGA TCTCTGGGCT TAATCTAGTG TTAAAACCTG GAGAACGGGT GGCGCTAGTG
GGCCCAAGTG GCGCCGGCAA GAGCACCTTG TTTGAATTGT TACTGCGCTT TTATAGTCTA
GATTCTGGCT GTATTACACT CGATGGCGTC GATATCGCGG ATCTTAGCCT GCATGAGCTT
CGCAGCCAAT ATGCACTCGT CCCTCAAGAG TCGGTGATTT TTGCCCATAA TGTGTTGGAA
AACGTGCGTT ACGGTAGGCC AGATGCCACA GAAGAAGAGG TGATTGCCGC CTGTGAAGCG
GCCAAGGCTC ATGAGTTTAT TACAGAATTT AAAGACGGTT ATCAAACCTA TTTAGGGGAG
CGTGGCGTGC GTTTATCCGG TGGTCAAAAA CAGCGTATCG CCATTGCCAG AGCCATACTC
GCCGACAGAC CTTTGCTATT ACTGGATGAA GCCACCAGTG CTCTGGATGC CATCAGTGAA
GATAAAGTTA AGCAAGCTCT AGATACCTTA ATGCAAGGCC GCACCAGTTT AGTTATCGCC
CATCGCCTTG CAACTGTGAT TAATGTGGAT CGCATTATCG TGTTAGATAA AGGCTGTGTG
GTCGCCACAG GTAACCATCA AACCTTGATG CAGACCAGTG AGCTATACCG AGAGTTTGCC
AGTTTGCAAC TGCTTACTGA GCCTAAGCAG ATGACGGCGT AA
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| Protein sequence | MNTSKSVAVI PWLAGFLRPY RWRVVAAIVF LFIGSLAWLS LGQGVRLMVD EGFMADNAGR
LNEIMVFILL ITFVSGAAVF FRFYLMTWLG ERVSADIRLT VYRHLLSLSP NFFASQRTGE
VISRFTADTT LLQSVVGASL SMALRSCVTV IGGIVMMGFT SVKLTLLVLL AVPLVLAPVA
ILGKKVRELS RKSQDKVGDL GAYIDETLHE IHTVQAYTHE DKDRQLFSER VEAVMLVAKA
RIGYRSLLIS SVMFLSIGAI ACVTWIGAKD VVSGAITGGE LSAFMFYAVM VAGAVATISE
VFSEIQRASG AAERLIELAN TPVDLPELET PKHLPSKTEL KLSGALSLEN VHFSYPSSPE
QQAISGLNLV LKPGERVALV GPSGAGKSTL FELLLRFYSL DSGCITLDGV DIADLSLHEL
RSQYALVPQE SVIFAHNVLE NVRYGRPDAT EEEVIAACEA AKAHEFITEF KDGYQTYLGE
RGVRLSGGQK QRIAIARAIL ADRPLLLLDE ATSALDAISE DKVKQALDTL MQGRTSLVIA
HRLATVINVD RIIVLDKGCV VATGNHQTLM QTSELYREFA SLQLLTEPKQ MTA
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