| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2888 |
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| Symbol | ksgA |
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| ID | 4019413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3451307 |
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| End bp | 3452110 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956940 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_563890 |
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| Protein GI | 91794239 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000792601 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAATA AAGTACATTT AGGCCATACG GCTAGAAAAC GATTCGGTCA GAACTTCCTT
ACCGACGACA GTATTATCAG CCGCATTGTT GGTGCCATCT CCCCGGATAA CGATCATGTG
ATGGTTGAAA TTGGACCTGG CCTTGGTGCG ATCACTGAGC CTGTTGCAAT GAGCATAGAT
AAACTCAGCG TGGTAGAGCT TGACCGCGAC TTAGTTGAGC GGTTGCAAAA TCACCCAACA
CTTAAAGATA AACTCGATAT CCATCAAGGT GATGCGCTGC AATTTGATTT CTCTACTTTG
CAGCAAGCGG GTAAAAAGAT GAAAGTATTT GGCAACCTGC CATACAACAT TTCTACCCCG
CTAATGTTTC ACCTATTTGA GTTTGCTGAA ATTATTGAAA CCATGCACTT TATGCTTCAA
AAAGAAGTGG TGCTGAGGTT ATCTGCAAGC CCAGGCTGCA AAGCCTATGG CCGCTTAACT
GTGATGGCGC AATACTACTG TCAAGTAGTC CCCGTGCTGG AAGTGCCACC CCATAGCTTC
ACTCCTGCGC CAAAAGTGGA TTCAGCAGTA GTACGCCTGT TACCTTATGC TAACAAGCCT
TGGCCGTGCA AAGACGTCAC AGTGCTCAGA CACTTATGTA CTACGGCCTT TAACATGCGC
CGTAAGACAC TGCGTAATAA CCTGAAGCAA CTTATCAGCG ATGAAGAGTT TGGCTTACTC
AATATTGATG CTAGCCTAAG ACCCGAGCAA ATCAGCGTCG AACAATATGT TGCGCTTGCA
AATTTGCTGT GCGACAAGCA ATAA
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| Protein sequence | MSNKVHLGHT ARKRFGQNFL TDDSIISRIV GAISPDNDHV MVEIGPGLGA ITEPVAMSID
KLSVVELDRD LVERLQNHPT LKDKLDIHQG DALQFDFSTL QQAGKKMKVF GNLPYNISTP
LMFHLFEFAE IIETMHFMLQ KEVVLRLSAS PGCKAYGRLT VMAQYYCQVV PVLEVPPHSF
TPAPKVDSAV VRLLPYANKP WPCKDVTVLR HLCTTAFNMR RKTLRNNLKQ LISDEEFGLL
NIDASLRPEQ ISVEQYVALA NLLCDKQ
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