| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2886 |
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| Symbol | |
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| ID | 4019411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3449000 |
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| End bp | 3450304 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637956938 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_563888 |
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| Protein GI | 91794237 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000330996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACA GTAAAAAAAT AGTAACTGCT TTATTGGCGC TCGCCATGAG CCAAACTGTC
ATGGCCGCAC CTGTGGCTCT AGATCGCGTT TCGGTGCAAA TTAATGACGG CATCATTCTA
GAAAGCGAGA TTGGCAACAT GCTTGCCACG GTTAGAGCCA ACGCGAATAA GTCAAACCAG
ACTCTGCCAT CGGAACAAGC CCTTCGCACT CAAGTGATTG AACGTCTGAT TTTAACCCGT
TTACAGCTGC AAATGGCTGA GCGCATTGGA CTGCAAATTG GTGATCTACA ACTAGACCAA
ACCATAGAGA GCATTGCCAA AGATCAGAAA TTGACCGTGA GCCAGTTACA ACAACAGCTA
GAAAATGATG GATTGAGCTT TAGCCAGTAC CGTGAACAAC TTAGAGAAGA AATCACCTTA
GGTGAAATAC AACGCATACA AGTACAGCGT CGTATTCAAG TTTCACCACA GGAAATTAGT
GGTTTAGTAA AACTCATGCA GGAGCAGGGA TTAAAAGAAG TCGAGTTTCA AATTGGACAT
ATCTTGATTG ATGTGCCTAG TGAGCCCAGC AGTGAACAAT TGGAAGCCTC CAGTAAACGC
GCTAATATCG TGTTAAAGCG CTTGAATGAG GGAGAAGATT TCCGCTCTAC CGCCATAGCC
TCTTCTTCAG GCCCTAAAGC CCTTGAAGGC GGTATTTGGG ACTACATGAA CATCAACGAA
ATGCCTACCT TATTCGCTGA AGTGGTCAAT GGCGCTAAAG TGGGCGATAT CATAGGTCCA
ATCAAGTCAG GTTCTGGCTT TCATATTATT AAAGTGATGG ATGCACGCGG CTTACAAACC
AAAGAAGTAG AAGAAGTTAA ATCTCGTCAT ATTCTGCTTA AACCATCCCC CATTTTATCG
GAAGAGCGGG CTAAAGCCAT GCTAGTGAAC TTCCAAAAAC AGATCTTAAG CGGTGAAGCA
GATTTTGCTG AATTAGCCCG CCAATATTCA GAAGATCCTG GTTCTGCGGC AAAAGGTGGC
GAGCTAGGTT GGTCAAGCCC AGACGTTTAT GTGCCTGAAT TTGCACAAAC CCTTAACAGC
TTGAAAGAAA ATGAAATGAG TGAGCCGTTT CGTACCACTC ATGGCTGGCA TTTGACCCAA
TTAATGGATA AGCGTAAAAC CGATGCCACC GAACAATTTA ACAGTAACCG CGCTCATCAA
TTAATTTTCC GTCGCAAGTT TAATGAAGAG TTACAAGCTT GGTTAGACGA GATGCGCAGT
GATGCCTATA TTGAAGTCTT CGAGCCAGAA GTTAACCGTG GGTAA
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| Protein sequence | MKHSKKIVTA LLALAMSQTV MAAPVALDRV SVQINDGIIL ESEIGNMLAT VRANANKSNQ
TLPSEQALRT QVIERLILTR LQLQMAERIG LQIGDLQLDQ TIESIAKDQK LTVSQLQQQL
ENDGLSFSQY REQLREEITL GEIQRIQVQR RIQVSPQEIS GLVKLMQEQG LKEVEFQIGH
ILIDVPSEPS SEQLEASSKR ANIVLKRLNE GEDFRSTAIA SSSGPKALEG GIWDYMNINE
MPTLFAEVVN GAKVGDIIGP IKSGSGFHII KVMDARGLQT KEVEEVKSRH ILLKPSPILS
EERAKAMLVN FQKQILSGEA DFAELARQYS EDPGSAAKGG ELGWSSPDVY VPEFAQTLNS
LKENEMSEPF RTTHGWHLTQ LMDKRKTDAT EQFNSNRAHQ LIFRRKFNEE LQAWLDEMRS
DAYIEVFEPE VNRG
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