Gene Sden_2882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2882 
SymboldjlA 
ID4019407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3443758 
End bp3444537 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content45% 
IMG OID637956934 
ProductDna-J like membrane chaperone protein 
Protein accessionYP_563884 
Protein GI91794233 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000450671 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATTT GGGGTAAGAT TTTTGGCTTT ATTATTGGCT ATATGTTTGG GCGTATATTT 
GGCGCTATTC TTGGGCTTTG GTTAGGGCAC CTTTATGATA AACGTCAAGG CTTTGAGGGC
TTAATTTCAA AAGGGCGAGA ACGGCAGGCG CAGTTTTTTA ATACCACGTT TGCGGTAATG
GGCCATGTGG CGAAAGCTTC GGGACAAGTC ACCCAGACAG ACATTAAAAT TGCCACTTTA
TTGATGGACC AAATGAAGCT TTCTGGTCAA GCAAGACAAG ATGCCCAGCA AGCCTTTAAA
ACAGGACGTG ATGCCGATTT TGATTTACAA CAAACCTTGG CGGATTTTCG CAAGTTAACT
TTCGGCCGGC CTGAGTTAGT GCAGATGTTT ATTGAAATTC AAATTCAAAC GGCATTGTCA
GACGGTGAAA TCGAATCCAA AGAACACGCG GTATTGAGCA CAATTGCCAA AGCCTTAGGC
TTAAGTTCAC AAGACTTAGA TGCACTATTA CAGCGCTGGC AGGCTGAGTT TCACCACCAC
TCATCTAATA GTGGCAGCCA GAAAATGGGC ATGGGTGACG CCTATTCTTT ATTGGGACTC
ACGGAAGCTG CAAGCGATCA AGAGATTAAG AAGACCTACC GTAAACTCAT GAATGAACAC
CATCCAGATA AGTTGGTGGC CAAAGGCTTG CCTGAGGAAA TGATGGCCTT AGCCAAGGCC
AAGACACAAG ATATTCAATT AGCCTACGAG CGGATAAAAA CTACCCGCGG CATGCGTTAG
 
Protein sequence
MRIWGKIFGF IIGYMFGRIF GAILGLWLGH LYDKRQGFEG LISKGRERQA QFFNTTFAVM 
GHVAKASGQV TQTDIKIATL LMDQMKLSGQ ARQDAQQAFK TGRDADFDLQ QTLADFRKLT
FGRPELVQMF IEIQIQTALS DGEIESKEHA VLSTIAKALG LSSQDLDALL QRWQAEFHHH
SSNSGSQKMG MGDAYSLLGL TEAASDQEIK KTYRKLMNEH HPDKLVAKGL PEEMMALAKA
KTQDIQLAYE RIKTTRGMR