| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2880 |
|---|
| Symbol | |
|---|
| ID | 4019405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 3442310 |
|---|
| End bp | 3442630 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637956932 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_563882 |
|---|
| Protein GI | 91794231 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3313] Predicted Fe-S protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000000244519 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAGT TAAGCTTTTT CAACATACCT AGCCCTTGCT TGGGGATCTG CCAAACAGAT
CCTCGCGGTT ATTGTGTGGG GTGTTTGCGT AGTCGTGACG AAAGGTTTAA TTGGCTCAAT
TTTAGCGACG CACAAAAGCA GGAAGTGAAT CGTTTGTGCT TGCAGCGCAA GAAACGTCGT
CAATATGCTA TTTTTGTAGA AAAAAGACAG GCTATTCAAG CCTCATTGGC TGAGTCTCAG
GCGCTGTTTA ATCCAGAATT TGATTTTGAA CCCGTTAATG AAAGTGATGA AACCATCAAC
AGGGCTGCTA ACAAGGATTG A
|
|---|
| Protein sequence | MEQLSFFNIP SPCLGICQTD PRGYCVGCLR SRDERFNWLN FSDAQKQEVN RLCLQRKKRR
QYAIFVEKRQ AIQASLAESQ ALFNPEFDFE PVNESDETIN RAANKD
|
|---|
| |