| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2864 |
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| Symbol | |
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| ID | 4019387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3420799 |
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| End bp | 3421560 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637956914 |
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| Product | putative lipoprotein |
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| Protein accession | YP_563866 |
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| Protein GI | 91794215 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000160081 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATAAAT TTGCCAAAGG TGCCGCCCTA GTTATGTTGT CACTCGCTAT TACAGCTTGT
AGCAGCAGCC CCGAAGATGC TGACATTGCT AACAAAAAGT CGCCAGAAGC GCTTTATGCT
CAAGCAAGAA CCTCAATGGA ACTAGGTAAT TATTCTAAAG CCGCTCGTTC ACTCGAAGCA
TTAGATTCTC GCTATCCATT CGGTCCACAT AAGACCCAAG TACAGTTAGA TCTCATTTTT
GCTTACTATA AAATGGATGA CGCCGCCTCT GGGTTGGCCA ATATTGACCG TTTTTTACGC
TTAAATCCAA CCCACCCAAA TATCGACTAC GTGCATTATA TGCGTGGTTT AACTAATATG
CAGGCAGATA ATTATTTATT TCACGATATG TTAGATATTG ACCGCACAGA TCGTGACACA
AAAAATGCTC AAGATGCCTT CAAAGATTTC GACAAACTCA TTAAAAGTTA CCCAAACAGC
AAGTATGCCG CCGATGCTCA GCAACGTATG CAATATTTGA AAAACCGTTT GGCTAACTAT
TCTGTGATCG TAGCAGAATA CTATATCAAG ATGAATGCTT GGAGTGCCGC GGCGGTTCGT
GCACAAACTG TGATGGAGAA ATTCCCAAAT ACACCTTCCA CAGAACGCGC ACTTGAAATC
ATGGCAGAAG CGTATCAGGA ATTGGGCCAA ACTCAGTTAA AACAAAATGT ATTGACTGTG
CTGAAGGCAA ACTTCCCAAG CAATGAAATG CTCAGCAACT AA
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| Protein sequence | MYKFAKGAAL VMLSLAITAC SSSPEDADIA NKKSPEALYA QARTSMELGN YSKAARSLEA
LDSRYPFGPH KTQVQLDLIF AYYKMDDAAS GLANIDRFLR LNPTHPNIDY VHYMRGLTNM
QADNYLFHDM LDIDRTDRDT KNAQDAFKDF DKLIKSYPNS KYAADAQQRM QYLKNRLANY
SVIVAEYYIK MNAWSAAAVR AQTVMEKFPN TPSTERALEI MAEAYQELGQ TQLKQNVLTV
LKANFPSNEM LSN
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