| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2847 |
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| Symbol | |
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| ID | 4019367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3396556 |
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| End bp | 3398046 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637956894 |
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| Product | sigma-54 factor, interaction region |
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| Protein accession | YP_563849 |
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| Protein GI | 91794198 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAACA TCCTCATCGT CGATGATAAT CCGTCGATAT GCAGCGCCTT AGCCCTGATG
CTAGACATTC ATGGCTACCA AAGTGTGATT TGTTATGGGC CGGAAGCTGC GCTAAACATC
ATGGCAGAGC AAGACATCAG TCTTGTCATT CAAGACATGA ATTTTAGCCG TGATACCACC
TCTGGTGAAG AAGGCAAAGA GCTCTTCTAC GCCCTAAGGC AAGCCCAGGC AGATGTGCCT
ATCATCCTAA TGACGGCCTG GACTCAATTA GAGACAGCTG TGGAGTTAGT CAAAGCCGGC
GCCGCCGATT ACATGGGCAA ACCATGGGAC GATGCCAAGC TGATTAACAG CATAGCCAAT
CTGTTAGCCA TTTATCATTT ATCAAAAGCC AATCAAAAGC TGAGTCGAGC CGATGCCCAG
CGCATGGCAT CCATTACCCA AGGTAATTTG TGCGGGTTAA TTTTTGCTAG CGGCGCCATG
CAGCGCTGCG TCGACTTGGC GCTGCAAATT GCCCGCTCCG ATGTTTCTGT GTTGGTCACA
GGCCCCAATG GCGCTGGGAA AGATAAAATT GCCGATATTC TCCACGCCAA CTCCCCCTTA
AAAGATAAGC CCTTTATTAA GGTTAATATT GGCGCCTTGC CGATGGATTT ATTGGAGGCT
GAGCTTTTTG GCGCCGAAGC GGGGGCCTTT ACTGGAGCCA ACAAGGTAAG AATTGGCCGT
TTTGAAGCCG CCGATGGTGG CACCTTGTTC TTAGATGAAA TAGGCAATCT GCCGCTGTCT
GGGCAAGTTA AACTACTCAG AGTGCTGCAA ACCGGTGAGT TTGAACGCCT TGGTAGCCAT
CAAACGCGCA AAGTGAATGT GCGGGTGTTA AGCGCCACCA ATTCCAATTT AACTGAAGAT
ATTGCAAAGG GCCGCTTTCG TGAGGATTTA TTTTATCGCT TGAATGTTAT CGAACTTAAG
TTGCCGTCAT TACATGAGCG CCTTGACGAT GTATTGCCCT TAGTGCAGCA CTTTATTGGT
CAAGGGGGGA GCTTGAGCAA GCCCGCCCAA CAAGCACTGC TTAATTACAC TTGGCCAGGG
AATGTGCGCG AATTAGAAAA TGCCTGTAAA CGTGCGGTGT TACTGGCGCC TTCCACTGTT
TTAACGGCCG AAGATTTTGG GTTTAGTGGG GCTGAGCTCA CTCAGTCCAG CTCCCATGGT
GCTGTGACTC CAAAGGCTAG TTTAGGCTCA CAAGCGGGCA CTGCGCCCAA GTTAGATCAC
ACTTTTACAA GCTCAAGTGC CCAGCAAGCG ACAAATGTAC CAAGCATGGG CACACAGGCA
TCATCACAGG TGCCATCGCC TGCAAATCCA CCTATCAGCC AAGTGGACAT TGAGCTGGCG
CTGGTGGAGC ACAAGGGCGT GATTGCGAGA GTGGCGAAAT CTTTGGGCCT CAGCCGTCAG
GCGCTTTATC GGCGGATGGA AAAGTTTGGC ATTCAGGTGG ACAAATCATG A
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| Protein sequence | MDNILIVDDN PSICSALALM LDIHGYQSVI CYGPEAALNI MAEQDISLVI QDMNFSRDTT
SGEEGKELFY ALRQAQADVP IILMTAWTQL ETAVELVKAG AADYMGKPWD DAKLINSIAN
LLAIYHLSKA NQKLSRADAQ RMASITQGNL CGLIFASGAM QRCVDLALQI ARSDVSVLVT
GPNGAGKDKI ADILHANSPL KDKPFIKVNI GALPMDLLEA ELFGAEAGAF TGANKVRIGR
FEAADGGTLF LDEIGNLPLS GQVKLLRVLQ TGEFERLGSH QTRKVNVRVL SATNSNLTED
IAKGRFREDL FYRLNVIELK LPSLHERLDD VLPLVQHFIG QGGSLSKPAQ QALLNYTWPG
NVRELENACK RAVLLAPSTV LTAEDFGFSG AELTQSSSHG AVTPKASLGS QAGTAPKLDH
TFTSSSAQQA TNVPSMGTQA SSQVPSPANP PISQVDIELA LVEHKGVIAR VAKSLGLSRQ
ALYRRMEKFG IQVDKS
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