| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2830 |
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| Symbol | |
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| ID | 4019349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3378682 |
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| End bp | 3379698 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637956876 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_563832 |
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| Protein GI | 91794181 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000555912 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGTGC TAGGTATTGA GACCTCTTGT GATGAGACGG GTATTGCGGT TTATGATGAC
AAACTCGGTT TGTTGTCACA TAAACTCTAT AGCCAAGTCA AGCTACATGC GGATTATGGT
GGCGTGGTGC CGGAATTGGC ATCTCGGGAT CACGTACGTA AAATAGTACC ACTTATCAAA
CAGGCGCTCT TAGATGCCAA TACCAGTGCC AATGAACTCG ATGGTGTTGC TTATACTAAG
GGCCCAGGGT TAATTGGTGC CTTATTGGTA GGTGCCTGTG TCGGCCGTTC TTTAGCTTAT
GCTTGGGGCA AGCCTGCGGT GGGCGTGCAT CACATGGAAG GGCATTTGCT AGCACCCATG
TTAGAAGATG ATGCTCCCGA GTACCCTTTT GTAGCTTTAT TAGTCAGTGG CGGTCATTCC
ATGTTAGTGA AAGTGGATGG TATAGGCCGC TATGAAGTGC TGGGTGAGTC AGTGGATGAT
GCCGCCGGTG AAGCCTTCGA TAAAACCGCC AAACTCATGG GGCTTGATTA TCCAGGTGGC
CCAAGACTTG CCAAATTGGC AAGTGAAGGT GTGCCCGCAG GTTATAAGTT CCCCAGGCCT
ATGACAGACA GGCCTGGGCT TGATTTTAGT TTTTCAGGCC TTAAAACCTT TACGGCCAAT
ACCATAATGG CTGAACCCGA TGATCATCAG ACCCGCGCCA ATATTGCCCG TGCATTCGAA
GAAGCCGTTG TGGATACCTT GGCGATAAAG TGTCGCCGTG CGCTTAAGCA AACCGGTTAT
AACCGCTTAG TGATTGCCGG CGGCGTGAGT GCCAATACTC GCTTGCGAGA AACCTTAGCT
GAATTGATGA CAAGTTTAGG CGGCAGAGTG TATTACCCTA GGGGTGAGTT CTGTACCGAT
AACGGCGCTA TGATAGCCTA CGCCGGTTTA CAGCGCTTAA AGGCGGGGCA GGTAGAGGAT
TTAAGCGTTA AAGGTCAGCC CAGATGGCCG CTGGATAGTT TGCCAGCAGT AGATTAA
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| Protein sequence | MRVLGIETSC DETGIAVYDD KLGLLSHKLY SQVKLHADYG GVVPELASRD HVRKIVPLIK
QALLDANTSA NELDGVAYTK GPGLIGALLV GACVGRSLAY AWGKPAVGVH HMEGHLLAPM
LEDDAPEYPF VALLVSGGHS MLVKVDGIGR YEVLGESVDD AAGEAFDKTA KLMGLDYPGG
PRLAKLASEG VPAGYKFPRP MTDRPGLDFS FSGLKTFTAN TIMAEPDDHQ TRANIARAFE
EAVVDTLAIK CRRALKQTGY NRLVIAGGVS ANTRLRETLA ELMTSLGGRV YYPRGEFCTD
NGAMIAYAGL QRLKAGQVED LSVKGQPRWP LDSLPAVD
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