Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2810 |
Symbol | |
ID | 4019329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3357494 |
End bp | 3358690 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637956856 |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_563812 |
Protein GI | 91794161 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0162] Tyrosyl-tRNA synthetase |
TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0678103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGATT TAGACCAAGT ATTAGCAGAG ATTAAACGCG GTACCGATGA GATTTTACTC GAAGCGGATC TGCTGGCAAA ACTAAAGGAA GGCCGTCCTT TACGGATAAA GCTGGGCGCC GATCCGACCG CGCCTGATAT CCACTTAGGC CATACTGTCA TTTTGAATAA AATGCGCACT TTCCAAGAGT TAGGCCATGA AGTCATCTTC TTGATTGGCG ACTTTACTGG CATGGTTGGC GACCCAAGTG GCAAAAACAG CACTCGCCCG CCTCTGACTC GAGAGCAAGT ACTTGCTAAC GCCGAAACCT ATAAAGAGCA GGTCTACAAG ATTTTAGACC CAGCTAAAAC CCGTATCGAG TTTAACTCAA GCTGGCTTGA GCCTTTGGGC GCTGCTGGCA TGATCCGCCT TGCATCACAG CAAACTGTGG CGCGGATGAT GGAGCGTGAT GATTTTAAGA AGCGTTATGC TTCGGGTCAG TCGATTGCTA TCCATGAATT TATGTATCCA CTGCTCCAAG GTTATGATTC AGTAGCCTTA AAAGCCGATG TTGAATTGGG CGGCACGGAT CAGAAGTTTA ACTTACTCAT GGGCCGTGAG CTGCAAAAAG CCGAAGGGCA GAAGCCGCAG ACAGTCATCA TGATGCCATT GCTTGAAGGC TTAGATGGCG TCAAGAAAAT GTCAAAATCT GCCCATAACT ACATTGGCGT GAGTGAGCCT GCTAATGAGA TGTTCGGTAA GATCATGTCG ATTTCAGACG ATCTCATGTG GCGCTATTAT GAATTGCTAT CATTCCGTCC GCTGGCCGAA ATCGAGCAAT TCAAAGCTGA TGTTGCTAAT GGTACCAACC CAAGAGACGT GAAAATTGCC TTGGCGAAAG AAATCATCGC CCGTTTCCAC GATGAAGCGC AGGCGCAATC TGCGCACCAA GCCTTTATCG ACCGCTTCCA AAAAGGCGCG ATTCCCGATG ATATCGAAGA AATTACCCTA GAAGCAGGCG AAGGCTTAGG GGTGGCTAAC TTACTTAAAG ATGCAGGCCT TGTTAGCTCA ACCTCAGAAG CCATGCGCAT GATAAAGCAA GGCGCGGTGA AGATGGATGG CGAGAAGCTT GAAGACAGCC GTCAGACCTT TGCTGCTGGC CTTGAAGCTG TATTCCAAGT GGGCAAACGC AAGTTTGCCA AAGTGACGCT TAAATAA
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Protein sequence | MADLDQVLAE IKRGTDEILL EADLLAKLKE GRPLRIKLGA DPTAPDIHLG HTVILNKMRT FQELGHEVIF LIGDFTGMVG DPSGKNSTRP PLTREQVLAN AETYKEQVYK ILDPAKTRIE FNSSWLEPLG AAGMIRLASQ QTVARMMERD DFKKRYASGQ SIAIHEFMYP LLQGYDSVAL KADVELGGTD QKFNLLMGRE LQKAEGQKPQ TVIMMPLLEG LDGVKKMSKS AHNYIGVSEP ANEMFGKIMS ISDDLMWRYY ELLSFRPLAE IEQFKADVAN GTNPRDVKIA LAKEIIARFH DEAQAQSAHQ AFIDRFQKGA IPDDIEEITL EAGEGLGVAN LLKDAGLVSS TSEAMRMIKQ GAVKMDGEKL EDSRQTFAAG LEAVFQVGKR KFAKVTLK
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