Gene Sden_2810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2810 
Symbol 
ID4019329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3357494 
End bp3358690 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content48% 
IMG OID637956856 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_563812 
Protein GI91794161 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0678103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGATT TAGACCAAGT ATTAGCAGAG ATTAAACGCG GTACCGATGA GATTTTACTC 
GAAGCGGATC TGCTGGCAAA ACTAAAGGAA GGCCGTCCTT TACGGATAAA GCTGGGCGCC
GATCCGACCG CGCCTGATAT CCACTTAGGC CATACTGTCA TTTTGAATAA AATGCGCACT
TTCCAAGAGT TAGGCCATGA AGTCATCTTC TTGATTGGCG ACTTTACTGG CATGGTTGGC
GACCCAAGTG GCAAAAACAG CACTCGCCCG CCTCTGACTC GAGAGCAAGT ACTTGCTAAC
GCCGAAACCT ATAAAGAGCA GGTCTACAAG ATTTTAGACC CAGCTAAAAC CCGTATCGAG
TTTAACTCAA GCTGGCTTGA GCCTTTGGGC GCTGCTGGCA TGATCCGCCT TGCATCACAG
CAAACTGTGG CGCGGATGAT GGAGCGTGAT GATTTTAAGA AGCGTTATGC TTCGGGTCAG
TCGATTGCTA TCCATGAATT TATGTATCCA CTGCTCCAAG GTTATGATTC AGTAGCCTTA
AAAGCCGATG TTGAATTGGG CGGCACGGAT CAGAAGTTTA ACTTACTCAT GGGCCGTGAG
CTGCAAAAAG CCGAAGGGCA GAAGCCGCAG ACAGTCATCA TGATGCCATT GCTTGAAGGC
TTAGATGGCG TCAAGAAAAT GTCAAAATCT GCCCATAACT ACATTGGCGT GAGTGAGCCT
GCTAATGAGA TGTTCGGTAA GATCATGTCG ATTTCAGACG ATCTCATGTG GCGCTATTAT
GAATTGCTAT CATTCCGTCC GCTGGCCGAA ATCGAGCAAT TCAAAGCTGA TGTTGCTAAT
GGTACCAACC CAAGAGACGT GAAAATTGCC TTGGCGAAAG AAATCATCGC CCGTTTCCAC
GATGAAGCGC AGGCGCAATC TGCGCACCAA GCCTTTATCG ACCGCTTCCA AAAAGGCGCG
ATTCCCGATG ATATCGAAGA AATTACCCTA GAAGCAGGCG AAGGCTTAGG GGTGGCTAAC
TTACTTAAAG ATGCAGGCCT TGTTAGCTCA ACCTCAGAAG CCATGCGCAT GATAAAGCAA
GGCGCGGTGA AGATGGATGG CGAGAAGCTT GAAGACAGCC GTCAGACCTT TGCTGCTGGC
CTTGAAGCTG TATTCCAAGT GGGCAAACGC AAGTTTGCCA AAGTGACGCT TAAATAA
 
Protein sequence
MADLDQVLAE IKRGTDEILL EADLLAKLKE GRPLRIKLGA DPTAPDIHLG HTVILNKMRT 
FQELGHEVIF LIGDFTGMVG DPSGKNSTRP PLTREQVLAN AETYKEQVYK ILDPAKTRIE
FNSSWLEPLG AAGMIRLASQ QTVARMMERD DFKKRYASGQ SIAIHEFMYP LLQGYDSVAL
KADVELGGTD QKFNLLMGRE LQKAEGQKPQ TVIMMPLLEG LDGVKKMSKS AHNYIGVSEP
ANEMFGKIMS ISDDLMWRYY ELLSFRPLAE IEQFKADVAN GTNPRDVKIA LAKEIIARFH
DEAQAQSAHQ AFIDRFQKGA IPDDIEEITL EAGEGLGVAN LLKDAGLVSS TSEAMRMIKQ
GAVKMDGEKL EDSRQTFAAG LEAVFQVGKR KFAKVTLK