Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2749 |
Symbol | tyrA |
ID | 4019268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3292244 |
End bp | 3293398 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637956795 |
Product | bifunctional chorismate mutase/prephenate dehydrogenase |
Protein accession | YP_563751 |
Protein GI | 91794100 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0287] Prephenate dehydrogenase [COG1605] Chorismate mutase |
TIGRFAM ID | [TIGR01799] chorismate mutase domain of T-protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.186478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCAAC CAATGAATGA GAAAACCACA GCAGAACTTG AGCACTTAAG GGATCTTATC GATGGCGTGG ATCAGCAGTT ACTGTTATTG CTGCGTAAGC GATTAGATTT AGTCGCCCAA GTGGGGGTGG TGAAACATGG TGCTGGCGTG CCTATCTATG CGCCGCATCG TGAAGCTTCA ATGCTTGCTA AACGCCGTGA TGAAGCCGCA AAGCTTGGGA TATCGCCGCA ACTCATCGAA GATGTGTTGC GCCGTTTGAT GCGTGAGTCT TATTTGAATG AAAAAGAGGT GGGTTTTAAG CAAGTTAAAC CTGACAGCGG CCATATTGTC ATCGTGGGAG GGGCCGGTAA GTTAGGTGCG CTTTTTAGTC AAATGCTGAG CTTGTCCGGT TATCAAGTTA AAAGCTTAGA TAAAGACGAC TGGCAACAAG CGAAGGCACT GTTTAGTGGT GCGGCTATGG TGATAGTCTC AGTGCCCATT AGCCTGACTT GTGCGCTTAT TCGTCGTGAA TTAAGCCAGC TGCCAGCAGA TTGTATACTT ACAGATCTGA CATCAGTTAA GGCAGAGCCA CTGCGAGCTA TGCTAGATGC TCATAGTGGA CCTGTTCTTG GGCTACACCC CATGTTTGGC CCCGATGTCG GCAGCTTTGC TAAACAGGTC GTGGTTGTCT GCCACGGGCG CCAACAGGAT AAATATCAAT GGTTTTTAGA TCAAATCGCT ATCTGGGGGG CGCGGATTGA AATTACCGAT GCAAAAAATC ATGATGAAGC CATGCAACTC GTTCAAGCAA TGCGGCATTT CTCAAGTTTT GTTTACGGAT TGAATCTATT CAAGAATAAC GCCGATATCG CCAACTTACT GCGTTTTAGC TCACCGATTT ATCGACTCGA GCTTGCTATG GTGGGACGTT TATTCGCTCA AGCCCCTGAG TTATACGCCG ATATAATATT AGCGCAACCT GGAAATGTTC AGCTGATGAG TGATTATCTG CAGCATTATC AACATGCATT GGAGACCTTA AAGCGCGGAG ATAGAGATGA ATTTATTCGG CAGTTTAGTC AGGTGTCCAC TTGGTTTGGG GATTATGCCC CCGCATTTGC TCGAGAGAGT GGCATGATGT TAGAGTCTGT CAATGATATG AAACCAAGGG AATAG
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Protein sequence | MDQPMNEKTT AELEHLRDLI DGVDQQLLLL LRKRLDLVAQ VGVVKHGAGV PIYAPHREAS MLAKRRDEAA KLGISPQLIE DVLRRLMRES YLNEKEVGFK QVKPDSGHIV IVGGAGKLGA LFSQMLSLSG YQVKSLDKDD WQQAKALFSG AAMVIVSVPI SLTCALIRRE LSQLPADCIL TDLTSVKAEP LRAMLDAHSG PVLGLHPMFG PDVGSFAKQV VVVCHGRQQD KYQWFLDQIA IWGARIEITD AKNHDEAMQL VQAMRHFSSF VYGLNLFKNN ADIANLLRFS SPIYRLELAM VGRLFAQAPE LYADIILAQP GNVQLMSDYL QHYQHALETL KRGDRDEFIR QFSQVSTWFG DYAPAFARES GMMLESVNDM KPRE
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