Gene Sden_2749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2749 
SymboltyrA 
ID4019268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3292244 
End bp3293398 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content47% 
IMG OID637956795 
Productbifunctional chorismate mutase/prephenate dehydrogenase 
Protein accessionYP_563751 
Protein GI91794100 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase
[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01799] chorismate mutase domain of T-protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.186478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAAC CAATGAATGA GAAAACCACA GCAGAACTTG AGCACTTAAG GGATCTTATC 
GATGGCGTGG ATCAGCAGTT ACTGTTATTG CTGCGTAAGC GATTAGATTT AGTCGCCCAA
GTGGGGGTGG TGAAACATGG TGCTGGCGTG CCTATCTATG CGCCGCATCG TGAAGCTTCA
ATGCTTGCTA AACGCCGTGA TGAAGCCGCA AAGCTTGGGA TATCGCCGCA ACTCATCGAA
GATGTGTTGC GCCGTTTGAT GCGTGAGTCT TATTTGAATG AAAAAGAGGT GGGTTTTAAG
CAAGTTAAAC CTGACAGCGG CCATATTGTC ATCGTGGGAG GGGCCGGTAA GTTAGGTGCG
CTTTTTAGTC AAATGCTGAG CTTGTCCGGT TATCAAGTTA AAAGCTTAGA TAAAGACGAC
TGGCAACAAG CGAAGGCACT GTTTAGTGGT GCGGCTATGG TGATAGTCTC AGTGCCCATT
AGCCTGACTT GTGCGCTTAT TCGTCGTGAA TTAAGCCAGC TGCCAGCAGA TTGTATACTT
ACAGATCTGA CATCAGTTAA GGCAGAGCCA CTGCGAGCTA TGCTAGATGC TCATAGTGGA
CCTGTTCTTG GGCTACACCC CATGTTTGGC CCCGATGTCG GCAGCTTTGC TAAACAGGTC
GTGGTTGTCT GCCACGGGCG CCAACAGGAT AAATATCAAT GGTTTTTAGA TCAAATCGCT
ATCTGGGGGG CGCGGATTGA AATTACCGAT GCAAAAAATC ATGATGAAGC CATGCAACTC
GTTCAAGCAA TGCGGCATTT CTCAAGTTTT GTTTACGGAT TGAATCTATT CAAGAATAAC
GCCGATATCG CCAACTTACT GCGTTTTAGC TCACCGATTT ATCGACTCGA GCTTGCTATG
GTGGGACGTT TATTCGCTCA AGCCCCTGAG TTATACGCCG ATATAATATT AGCGCAACCT
GGAAATGTTC AGCTGATGAG TGATTATCTG CAGCATTATC AACATGCATT GGAGACCTTA
AAGCGCGGAG ATAGAGATGA ATTTATTCGG CAGTTTAGTC AGGTGTCCAC TTGGTTTGGG
GATTATGCCC CCGCATTTGC TCGAGAGAGT GGCATGATGT TAGAGTCTGT CAATGATATG
AAACCAAGGG AATAG
 
Protein sequence
MDQPMNEKTT AELEHLRDLI DGVDQQLLLL LRKRLDLVAQ VGVVKHGAGV PIYAPHREAS 
MLAKRRDEAA KLGISPQLIE DVLRRLMRES YLNEKEVGFK QVKPDSGHIV IVGGAGKLGA
LFSQMLSLSG YQVKSLDKDD WQQAKALFSG AAMVIVSVPI SLTCALIRRE LSQLPADCIL
TDLTSVKAEP LRAMLDAHSG PVLGLHPMFG PDVGSFAKQV VVVCHGRQQD KYQWFLDQIA
IWGARIEITD AKNHDEAMQL VQAMRHFSSF VYGLNLFKNN ADIANLLRFS SPIYRLELAM
VGRLFAQAPE LYADIILAQP GNVQLMSDYL QHYQHALETL KRGDRDEFIR QFSQVSTWFG
DYAPAFARES GMMLESVNDM KPRE