Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2735 |
Symbol | pgi |
ID | 4019254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3277299 |
End bp | 3278936 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637956781 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_563737 |
Protein GI | 91794086 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000381745 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAC TTACTCAAAG CAGCTGCTGG CAGGCCCTTA TTGCCGATGC AGCCAAGCTG CCTCACATGC GAGACTTATT TGCTCAAAAC CCTCAAAGGT TTGAGCAGAT GAGCCTGAAC GCCTGTGGTC TTTTTTTGGA CTACTCAAAA AACCGTGCGG ATGAGACCAC ACTTAAACTA TTATTTTCAT TAGCGAAAGA AGCAAAGCTT ACAGAAAAAA TAGCCGCCAT GTTTAATGGT GACATTATTA ATACCACTGA GCAGCGCGCA GTATTACATA CCGCCCTTCG CAGTAAAGCC TGCCAAGATA TACGCGTCGA TGGGGTTAAT ATTGTCCCAG AAGTGCAGCA AACCTTGGAT AAAATGGCTC AATTTGTGGA TTCAGTGCAA ACTGGACAAT GCAAAGGCTA CACAGGCAAG CGCATCACTG ACATAGTCAG CATTGGTATT GGTGGCTCAT TCTTAGGCCC TAAGATAGTC TCACAAGCGC TACGCCCTTA TTGGAAGGCC GGGCTTAATT GCCATTTCGT TGCCAATGTC GATGCCAGTT CAATTTGTGA AAAATTAAAG CTGCTTAATG CTGAAACCAC TTTGTTTGTT ATGTCATCAA AGTCTTTTGG CACTCAAGAA ACCTTGACCA ATACCTTAAG CGCTAAAGAT TGGTTCTTAG ACCAAGGCGC CACTCAGGCT GATATCGCTA AGCACTTCGT TGCTGTGACC TCAAACGTCA CCAAGGCCAC TGAATTTGGC ATGGACGCAG ACAATATTTT CCCTATGTGG GACTGGGTCG GTGGTCGATA TTCTCTGTGG TCAGCCATAG GATTACCTAT TGCGCTATTA ATTGGTATGG ACAATTTCCG TTTGCTGCTC GATGGCGCCC ATCAAATGGA TGAGCACGTT AAAGCCGCGC CATTAGAGCA AAACATGCCA GTCATCATGG CGCTGTTGTC TGTGCTTTAT ACTAATTTCC ATGGGGCTCA GTCTCATGTG GTATTGACCT ATGACCATTA TTTACGTGGG CTCCCTGCCT ATTTCCAGCA ACTCGATATG GAAAGCAATG GTAAATCGGT AACCTTAAAT GGCACTCAAG TGGATTACAG CACAGGGCCT GTCATTTGGG GCGGTGAAGG CACCAATGGT CAGCACGCTT ACCACCAATT GTTGCATCAA GGCACAGCAC TTATTCCTGC CGATTTTATT ATGCCATTGC AAAGTCATAA TCCGCTGGGC GAACACCATG CACAACTTGC ATCTAACTGT TTTGGTCAAA CTCAAGCCCT AATGCAAGGT CGAACCTTCG AAGAGGCCAT GGCAGAGCTT TCTCAAAGCT CACTTAATGA AGCCGATAAA ACCCTCATCG CTAAACACAA GGTGATGCTG GGCAACAAGC CTAGTAACAC CTTGCTGATG GATAAGCTAA CGCCGCAAAC CTTAGGTTCG CTTATCGCAC TCTATGAGCA CAGAACCTTA GTACAAGGCG CGATTTGGCA AATTAACTCA TTCGATCAGT GGGGTGTTGA GCTTGGAAAG CAGCTCGGCA ATGATGTGCT AGCTCGAATT GGTGCGGCGC ACAATGCCAC AGAACTCGAT TCATCCAGCA ATGCACTGAT AAATCGGTTC AGGCAAGGTA AAATTTAA
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Protein sequence | MTQLTQSSCW QALIADAAKL PHMRDLFAQN PQRFEQMSLN ACGLFLDYSK NRADETTLKL LFSLAKEAKL TEKIAAMFNG DIINTTEQRA VLHTALRSKA CQDIRVDGVN IVPEVQQTLD KMAQFVDSVQ TGQCKGYTGK RITDIVSIGI GGSFLGPKIV SQALRPYWKA GLNCHFVANV DASSICEKLK LLNAETTLFV MSSKSFGTQE TLTNTLSAKD WFLDQGATQA DIAKHFVAVT SNVTKATEFG MDADNIFPMW DWVGGRYSLW SAIGLPIALL IGMDNFRLLL DGAHQMDEHV KAAPLEQNMP VIMALLSVLY TNFHGAQSHV VLTYDHYLRG LPAYFQQLDM ESNGKSVTLN GTQVDYSTGP VIWGGEGTNG QHAYHQLLHQ GTALIPADFI MPLQSHNPLG EHHAQLASNC FGQTQALMQG RTFEEAMAEL SQSSLNEADK TLIAKHKVML GNKPSNTLLM DKLTPQTLGS LIALYEHRTL VQGAIWQINS FDQWGVELGK QLGNDVLARI GAAHNATELD SSSNALINRF RQGKI
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