| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2724 |
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| Symbol | |
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| ID | 4019243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3262592 |
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| End bp | 3263527 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956770 |
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| Product | riboflavin biosynthesis protein RibF |
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| Protein accession | YP_563726 |
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| Protein GI | 91794075 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0196] FAD synthase |
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| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000103356 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTGA TCCGCGGTAT ACACAATATT TTACCCTCAC ATCATGGCTG TGTGCTTACC
ATAGGTAATT TTGATGGTGT GCACCGTGGT CATGGACAAG TGATCGGTAA TTTGGTGAGT
AAAGCCCACC ACTTTCAATT GCCTGCAACC TTGATGACCT TTGAACCACA GCCAATGGAG
CGCTTCCTAG GTGCCAATGC ACCGGCGCGC TTGAGTTTGC TAAGGGATAA AGTCCGTTTG
CTGGATGAAT TAGAAGTGGA TCGGCTATTG TGCGTTAACT TTACCCATGC ATTTGCCAGC
CAAACCGCGG AAACTTTTAT CGAAGATTTA CTGGTAAAAA AGCTTGGGGT TAAATATTTA
GTGGTTGGCG ACGATTTTTG TTTCGGCAAA GGTCGATTGG GCAATTTTGA TATGCTGCTT
AACGCGGGTA AAAAACACGG TTTTACTGTG GTGAGTACCC AAAGTTTTAT GTTAGGTTCG
CACAGGGTGA GTTCAACCGC AGTGAGGGAG CAACTCGCAG CAGGCAATCT TGAGCAAGCA
CGGCGCTTAT TAGGTCATCC ATTTATCTTG AGTGGCCGAG TGGCCCATGG CAAGAAAATC
GGCCGCACCA TAGGTTTTCC GACGGCGAAT ATCGCTATGA AGCGTAATGT GGTGCCGGTG
CGAGGCGTGT TTGCTGTACG TATTAATTGG CAAGGTAGTG ATAGCTACGA AGGGGTTGCT
AATGTGGGCT TTAGGCCTAC AGTACAAGGG CAAACCTGCC AGCTAGAAGT GCACTTGTTT
GACTTTGATG GTGATTTATA TGGCAAGCAT GTTGAGGTTG AGTTAGTGGC CAAAATACGT
GAAGAACAGC CATTTGAATC CCTCGATGCA CTTAAACAAC AAATTTTGAA TGATGCAAAC
CAAGCGCGAG CTTTGTTTGG CAATGATGCT AGCTAA
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| Protein sequence | MELIRGIHNI LPSHHGCVLT IGNFDGVHRG HGQVIGNLVS KAHHFQLPAT LMTFEPQPME
RFLGANAPAR LSLLRDKVRL LDELEVDRLL CVNFTHAFAS QTAETFIEDL LVKKLGVKYL
VVGDDFCFGK GRLGNFDMLL NAGKKHGFTV VSTQSFMLGS HRVSSTAVRE QLAAGNLEQA
RRLLGHPFIL SGRVAHGKKI GRTIGFPTAN IAMKRNVVPV RGVFAVRINW QGSDSYEGVA
NVGFRPTVQG QTCQLEVHLF DFDGDLYGKH VEVELVAKIR EEQPFESLDA LKQQILNDAN
QARALFGNDA S
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