| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2720 |
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| Symbol | ispH |
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| ID | 4019239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3257662 |
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| End bp | 3258621 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956766 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_563722 |
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| Protein GI | 91794071 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAA TGGATCCTAC AAGCCCAGAG CTTAATATTT TACTGGCCAA TCCTCGTGGC
TTCTGCGCAG GTGTGGATAG AGCCATCAGC ATAGTCGAGC GCGCACTAGA ACTGTTTGAG
CCGCCGATTT ATGTGCGCCA TGAAGTGGTG CATAATCGTT ACGTGGTGGA TAACTTAAAG
CAACGCGGTG CCTTATTTGT CGATGAGCTT GAACAAGTGC CAGACAATAG CATAGTAATT
TTCAGCGCTC ATGGTGTGTC CCAAGCCGTA CGCAAAGAAG CCAAAGACAG AGGCTTAAAA
GTCTTCGATG CAACCTGTCC ATTGGTCACT AAGGTGCACT TACAAGTGAC CCGGGCGAGC
CGTAAGGCAA TTGAATGCAT CTTGATTGGC CACGAAGGTC ACCCAGAAGT CGAAGGCACC
ATGGGGCAGT ATGATAACCC TAACGGCGGC GTTTATTTAA TTGAGTCTCC TGAAGACGTG
GCTAAGCTTA AGGTAAAAAA TCCCGACAAC CTTTGCTTTG TGACTCAAAC CACGCTTTCA
GTGGACGATA CTCTGGACAT CATTGCTGCG TTACAGCAGA AGTTTCCTTC TATTGAGGGT
CCGCGTAAAG ACGATATCTG TTATGCCACT CAAAATCGTC AAGATGCAGT AAGAAACATG
GCTGCGGATG TGGATTTACT GATTGTTGTC GGCTCTCAAA ATAGCTCTAA TTCTAATCGT
TTGCGTGAGC TGGCGATTAA AAGCGGCACT CAAGCCTATT TAGTAGATAC CGCTGCCGAT
GTGGAACTTG ACTGGTTTAC CGGTGTGACT CGAGTCGCTG TTACAGCAGG AGCGTCAGCG
CCTGAAATAT TAGTGCAGCA GGTCATCGAG GCTATCGCGG CAATAGCACC AAGTGTGGTA
ACAGAGATTG AAGGGCGCAA GGAAGATACC GTATTTGCCG TGCCTGCTGA ACTCAGGTAA
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| Protein sequence | MLKMDPTSPE LNILLANPRG FCAGVDRAIS IVERALELFE PPIYVRHEVV HNRYVVDNLK
QRGALFVDEL EQVPDNSIVI FSAHGVSQAV RKEAKDRGLK VFDATCPLVT KVHLQVTRAS
RKAIECILIG HEGHPEVEGT MGQYDNPNGG VYLIESPEDV AKLKVKNPDN LCFVTQTTLS
VDDTLDIIAA LQQKFPSIEG PRKDDICYAT QNRQDAVRNM AADVDLLIVV GSQNSSNSNR
LRELAIKSGT QAYLVDTAAD VELDWFTGVT RVAVTAGASA PEILVQQVIE AIAAIAPSVV
TEIEGRKEDT VFAVPAELR
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