| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2697 |
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| Symbol | trmB |
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| ID | 4019214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3229989 |
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| End bp | 3230705 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956741 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_563699 |
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| Protein GI | 91794048 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.376595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGACG TAACTACCGC TGAGTTTAAT GAAGAAGGCA AGTACCTTCG CAAAATCAGA
AGCTTTGTAT TAAGAGAAGG CCGCTTGACT AAAGGTCAGG CTCAGGCAAT TGAAGCCCAT
TGGCCTACCA TGGGTTTAGA TTACACCCCT GAAGCGATAG ATTTAGTCAA AATATTTGGC
CGTGAAGCGG ACACAGTGTT AGAAATCGGC TTTGGCATGG GCGGCTCTTT AGTTGAAATG
GCTGCAGCAG CCCCTGAACT TAACTATATT GGCATTGAAG TGCATAAACC TGGTGTGGGT
GCCTGTTTAG GCGTAGCGGG TGAAGCTAAA GTCACTAATC TGCGCGTCTA TCATCATGAT
GCTATGGAAG TGTTAGAGCA CAGTATTGCC GATGGTTCAC TTTCTCGTGT GCAACTCTTT
TTCCCAGATC CTTGGCATAA GAAACGCCAC CATAAGCGCC GTATCGTTCA AGCTGAATTT
GCTGAACTTA TTCGCCGTAA ATTAAAGCTT GGCGGTGTAT TCCATATGGC CACCGACTGG
GAAAACTACA GCGAGCATAT GCTCGAGGTG ATGAACCTTG CACCTGGTTA TAAGAATCAG
TCTCCTACAG GTACTGTTGT TGAACGTCCA GATCACAGAC CTTTGACTAA GTTTGAGGCT
CGCGGCCACA GACTCGGCCA CGGCGTTTGG GACATAATGT TCGAAAGAAT AAGTTAA
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| Protein sequence | MSDVTTAEFN EEGKYLRKIR SFVLREGRLT KGQAQAIEAH WPTMGLDYTP EAIDLVKIFG
READTVLEIG FGMGGSLVEM AAAAPELNYI GIEVHKPGVG ACLGVAGEAK VTNLRVYHHD
AMEVLEHSIA DGSLSRVQLF FPDPWHKKRH HKRRIVQAEF AELIRRKLKL GGVFHMATDW
ENYSEHMLEV MNLAPGYKNQ SPTGTVVERP DHRPLTKFEA RGHRLGHGVW DIMFERIS
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