Gene Sden_2692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2692 
Symbol 
ID4019209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3223712 
End bp3225586 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content45% 
IMG OID637956736 
Producthypothetical protein 
Protein accessionYP_563694 
Protein GI91794043 
COG category[S] Function unknown 
COG ID[COG4805] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.99463e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCTAT ATCGTAAAAG TGTATTGTCA CTCGCCCTAC TCTCGGCGCT GACTGGACTA 
GCCTTCAATG CCTATGCCCA TGATGGGACT CATGTGGCGA CAAGTAGTGT AACTAGCGTG
AGCTCAGCCT CAAGTAAAAC AGAAAACCTA AGTGATGCAT CAAGCCAGGC AAACCAATTG
TTTGATGAGA TATTTATGGC GGAAGTCATG GCCAATCCAG TGTCACAAAC TTTTCTAGGC
ATCAAACAAG ACTACGACAA ATGGAATGAC ATCAGTGATG CCGCCGAAGA TAAGCGCATG
CTTAAAATAA AAGAGCATTT GGCAACACTT GCAAAAATTG ACCAACACAA ACTAGATGGA
CAAACTCGCT TAAGCTATGA ATTACTTGAG GCCGACTTGA AGCAAACCTT AGCTCAAGAT
AAATGGCGTC ATCACAGCTA CCCAGTGAAT CAAATGTACG GCCAGCATAC TATGCTGGCA
TCATTATTAA TCAACCAACA TCAAATTATC GACATCAGTG ATGCCAATGC CTATATCAGT
CGTTTGAACG GTATACCTGA GATGCTGGCT CAGCTTGAAA TCAATCTTGA AATTAGAGCG
AAAAAAAATA TCATCGCACC CAAATTTGTC TTCCCTTACG CCATTTCGGA CAGTAATAAC
ATCATCAAAG GTGCTCCCTT TGATGACAGC GACAAGTCAA GTGCAATTTG GGCCGACTTT
AATCGTAAAA TAGATGCCTT AACTTTGACC CCTGAGCAGA AAAAACAATT ACTGACTCAA
GCAAAAAGTG CTTTAACAGA TAAGGTAAAA CCAGCCTATG AACACTTTAT TAGCTATATA
AAAACCTTAG AAGCCAGAGC CGATAATCGC GATGGAGTGT GGAAATTCCC CGATGGCGAA
GCTTTTTATA ATGATGCACT GGCCAAGACC ACGACAACAG AGATGTCATC AACTCAAATA
CACCAACTTG GTCTTGCCGA AGTTGAGCGT ATTCATGCCG CTATGGAAGT CATCAAGAAT
AAGGTGAACT TCAAAGGCAG CTTACAAGCA TTTTTTGTCT TTATGCGGGA CGATCCACAG
TTTTATTACC CAGATACCCT AGAGGGCAGA GCGGCCTATC TTACCGAAGC CAGAACCGTT
ATCAACACTA TGCATTCTCG CCTCGATGAA GTGTTTAACA TCCAGCCAAA GGCTGAGTTA
AAGGTAAAGA AAGTTGAAGC GTTCCGAGAA CAATCTGCTG GCAAGGCCTT CTACGAGCCA
CCAGCCCCCG ATGGTTCACG ACCGGGTACC TTTTACGCCA ATCTTTATGA CATGAAGTCC
ATGCCTAAAT ATCAGCTCGA GGCGTTAGCC TATCATGAGG GGATCCCAGG ACATCATATG
CAAATTGCCA TAGCACAAGA GCTTACCAAT GTGCCTAAGT TCCGTAAATT TGGCAGTTAT
ACTGCGTATA TCGAAGGCTG GGGCCTGTAT ACCGAATATT TCCCTAAGGA AATGGGGTTC
TATGCCGACC CCTACTCTGA CTTTGGACGT CTTTCTATGG AACTTTGGCG CGCCTGTCGT
CTGGTTGTCG ACACTGGCAT CCATAGCCAG AAATGGACTC GTGAGCAAGC CATTGCCTAC
TACATGGATA ACACCCCCAA CGCCGAATTA GACGCCATTA AAATGGTAGA ACGCCATATC
GTAATGCCAT CCCAAGCAAC CGCGTACAAG GTAGGGATGA TAAAAATTCT CGAGCTTAGA
GAAAAAGCGC AACAGCAGCT GGGGGAGCAA TTCTCCTTAG GCCAGTTCCA TACCTTGTTG
CTTAAAAATG GCCCGCTGCC GCTCACAATT CTAGAGCAAC AAGTGGAAGA GTGGATAAAA
GCTAAGAGTA TTTAA
 
Protein sequence
MPLYRKSVLS LALLSALTGL AFNAYAHDGT HVATSSVTSV SSASSKTENL SDASSQANQL 
FDEIFMAEVM ANPVSQTFLG IKQDYDKWND ISDAAEDKRM LKIKEHLATL AKIDQHKLDG
QTRLSYELLE ADLKQTLAQD KWRHHSYPVN QMYGQHTMLA SLLINQHQII DISDANAYIS
RLNGIPEMLA QLEINLEIRA KKNIIAPKFV FPYAISDSNN IIKGAPFDDS DKSSAIWADF
NRKIDALTLT PEQKKQLLTQ AKSALTDKVK PAYEHFISYI KTLEARADNR DGVWKFPDGE
AFYNDALAKT TTTEMSSTQI HQLGLAEVER IHAAMEVIKN KVNFKGSLQA FFVFMRDDPQ
FYYPDTLEGR AAYLTEARTV INTMHSRLDE VFNIQPKAEL KVKKVEAFRE QSAGKAFYEP
PAPDGSRPGT FYANLYDMKS MPKYQLEALA YHEGIPGHHM QIAIAQELTN VPKFRKFGSY
TAYIEGWGLY TEYFPKEMGF YADPYSDFGR LSMELWRACR LVVDTGIHSQ KWTREQAIAY
YMDNTPNAEL DAIKMVERHI VMPSQATAYK VGMIKILELR EKAQQQLGEQ FSLGQFHTLL
LKNGPLPLTI LEQQVEEWIK AKSI