Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2691 |
Symbol | rdgC |
ID | 4019208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3222511 |
End bp | 3223422 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637956735 |
Product | recombination associated protein |
Protein accession | YP_563693 |
Protein GI | 91794042 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2974] DNA recombination-dependent growth factor C |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000150685 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGTTTA AAAATCTTAC CCTCTATCGT TTTAATAAGC CTTTTTCTGT GGATACCGAG GCACTGGAAA CTGCATTAGC TGATTTCACT TTTTCACCTT GTTCTAGCCA AGATATCAGT AAGTTTGGCT TCTCTAAAGC CCTAGGTAAA AAAGGCAGCG CCTTAGTGCA TAGCGCCGAA AATCGTCATC TCATTTGTGT GACTAAAGAA GAGAAGATTC TTCCTGGGCA AGTGATCAAA GAAGCCTTAG ATGAGAAAGT GGCTGAAATT GAAGAACTAG AAAACCGCAA GGTCACTAAG AAAGAAAAAG ACACCATTAA AGATGAAATC ACTACCACCT TATTACCACG AGCATTTTCG CGTCGCAGTC AGACCCACGC GTTAATTTTG CCCGAAATAG AGATGATTTT GGTAGACAGT TCAAGTGCCA CTAAAGCCGA AGAGTTGTTA GCTTTATTGC GTAAAGCCTT AGGCAGTCTG CCCGTCATTC CTTTAAGTTT CACCACACCA ATAGAACAGA CATTAACCCA ATGGCTGCAA GCTGGTGAAT CACCGCTGCC CTTTGCCATG CAAGATGAGG CCGAGCTTAA GTCTGATTCA GATGAAGGTG GTATCGTCAG ATTTAAGCAG CAAGTGCTGC AAGAAGATGA AGTACTTGCC CATATAGCAA CAGGAAAGTC AGTGCATAAA CTGGCACTGC ATTTTGCTCA GTCCATCGCC TTTTTAATGC AATCTGATGC CAGCGTCAAA CGCCTTAAGT TTTCTGAAGA GTTTAGGGCC AATAACGATG AAGTGAGTGG TGAAGATCCA TTAGCCAGAC TCGATGCAGA CTTTGCTTTA ATGGGCAGCG AGTTAATCGC CTTTGTGCAA GCCTTAACGC AAGCCTTAGG CCCTATGGAA GAAAGCATCT AA
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Protein sequence | MWFKNLTLYR FNKPFSVDTE ALETALADFT FSPCSSQDIS KFGFSKALGK KGSALVHSAE NRHLICVTKE EKILPGQVIK EALDEKVAEI EELENRKVTK KEKDTIKDEI TTTLLPRAFS RRSQTHALIL PEIEMILVDS SSATKAEELL ALLRKALGSL PVIPLSFTTP IEQTLTQWLQ AGESPLPFAM QDEAELKSDS DEGGIVRFKQ QVLQEDEVLA HIATGKSVHK LALHFAQSIA FLMQSDASVK RLKFSEEFRA NNDEVSGEDP LARLDADFAL MGSELIAFVQ ALTQALGPME ESI
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