Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2690 |
Symbol | |
ID | 4019207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3221187 |
End bp | 3222140 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637956734 |
Product | porin |
Protein accession | YP_563692 |
Protein GI | 91794041 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000491313 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAACG TTTTTAGCAA ATCTTTACTC GCTGCTGCGA TTGCAACTGC AACCCTGTCA ACTGCTCACG CAGGTGAACC GCTTCAAGTG TACGGTAAGT TAAACGTCAC AGCTCAATCA AATGATGTAA AAGGTGACAC TAAAACCACT ATCCAGAGCA ATGCATCTCG ATTTGGCGTA AAGGGTGATC TTGCGTTAAA TAATTCTCTA GAAGCTTTTT ATACCATCGA ATATGAAGTC GATACTGGTG ATGACGTTAA AGAAAACTTC AAGGCGCGTA ACCAATTTGT GGGTTTAAAA GGCAACTTCG GTGCCGTTTC TGTGGGTCGT AATGACACTA TGTTAAAAGT GTCTCAAGGC AAAGTGGATC AGTTCAACGA TTTAGAAGCC GATGCTAAAA ACCTGTTTAA AGGTGAAAAT CGCATGGCAC AAACGGCCAC CTATTACACC CCTTCAGTGG GGGATTTCAA ATTTGGTGTG ACTTATGTTG CCGATGGTGA CAGCGACCAA GCCTATCTGG ATCTAAACAA AATAGAACAA ACCCGTGACG GCTTCAGCTT AGCGGCCATG TACGGTGATG ATGAGCTGAA AACCACTAAC TTCTACGCGG CGCTCGCCTA TGATTCGGAA GTTAAAGGTT ATGATATTCT GCGTGCAACC GTGCAAGCAA AATTAGCAGA TCTCGTTGTT GGTGGCATGT TCCAGCAGGA AGAGAAAGTT GATGGTGGCG ATAGTAAAAA CGGTTACCTG TTAAGTGCCG CTTATGAAAT ATCAGCAGTA ACCTTAAAAG CCCAGTTCCA AGATATGGAA GACATGGGCG ATTCTTGGTC TGTGGGCGGC GACTACAAGT TAGCTAAACC AACTAAGTTA CTGGCGTTCT ACTCCAATCG TTCGTTAGAA AAAGCAACCA GCGATGACAA CTACTTCGGC ATAGGCATTG AACATAAGTT CTAA
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Protein sequence | MMNVFSKSLL AAAIATATLS TAHAGEPLQV YGKLNVTAQS NDVKGDTKTT IQSNASRFGV KGDLALNNSL EAFYTIEYEV DTGDDVKENF KARNQFVGLK GNFGAVSVGR NDTMLKVSQG KVDQFNDLEA DAKNLFKGEN RMAQTATYYT PSVGDFKFGV TYVADGDSDQ AYLDLNKIEQ TRDGFSLAAM YGDDELKTTN FYAALAYDSE VKGYDILRAT VQAKLADLVV GGMFQQEEKV DGGDSKNGYL LSAAYEISAV TLKAQFQDME DMGDSWSVGG DYKLAKPTKL LAFYSNRSLE KATSDDNYFG IGIEHKF
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