Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2687 |
Symbol | |
ID | 4019204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3217617 |
End bp | 3218819 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637956731 |
Product | putative oxygen-independent coproporphyrinogen III oxidase |
Protein accession | YP_563689 |
Protein GI | 91794038 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000667437 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCAGT TGCCGCCATT AAGCCTCTAT ATCCATATTC CTTGGTGCGT TCAAAAGTGC CCTTATTGTG ATTTTAATTC CCACGGTCAG CATGGGGAAT TACCGCAACA AGCTTATGTG GATGCCCTAT TGGCCGACCT AGCTCAAGAC ATGGATTATG TTCAAGGCAG GCAATTGCAC ACCATTTTTA TCGGTGGCGG CACCCCCTCT TTGTTCGACG CTAAGCAAAT TGAGCGACTG CTCCTTGGCG TCCAAGCGCT TATCCCTTTT GAACGAGATA TAGAAATCAC CATGGAAGCC AACCCTGGCA CCCTAGAACA TGATGATTTT AGCGCCTACA GGGCAGCAGG GGTGACTCGA CTCTCTATCG GGGTGCAGAG CTTTGCCAAA GATAAGCTAA ATTTACTTGG GCGAATTCAC GACCAAAATG AAGCCGTGGT TGCGGCGCAA AAAGCCAAGG AGGCCGATTA CTTAAGTTTT AATCTCGATT TGATGCACGG CTTACCTAAC CAAAGCTTTA GTGAAGCCAT GCATGATATC GATACCGCCG TCTCTCTGGC GCCGCCGCAT TTGTCTTGGT ATCAGCTCAC CATAGAGCCC AATACTTTAT TCCACTCTAA ACCGCCGCAA TTGCCAGATG ATGAAGACTT ATGGCAGATT TATCAGCAAG GTCAGCAAAA GCTAGCCGCC TTAGGTTATG AGCAATATGA GATATCAGCC TATGCTAAGC CTGGCTTTCA ATGCCGACAT AATCTTAACT ACTGGCAGTT TGGCGATTAT TTAGGCATAG GCTGCGGCGC ACACGGTAAG ATAACCTTAA TGGATGAGAC CAGCGTTATC CGCACCGTTA AGATAAAACA CCCTAAGGGT TACCTTGCTA GCGCTGAAAC CGCGCTTTCT GCGAATAAAT CACATGAAGC TAGTCCGTCA ACGGCTAATA AGGCTAATCA CTTCGCCGCA TCAGTGACGC CAATCTTAAG CGAAGACATG GGACTGGAAT ACTTGATGAA CCGCTTAAGG CTAATGACGC CCATCCCTAA GACTGAATTT GAGCAGCGCA CCGGCCAAGC CCATAGCAGT CTTGATATTG GCATGGCGAA AGCAGAGTCT CGCGGGCTAA TCACTCAGGA TGAGACTCAC TGGCAGCTGA CCAGTAAAGG CCATATGTTT GTTAACGATA TTTTGTCCCA ATTTCTTGAT TAG
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Protein sequence | MLQLPPLSLY IHIPWCVQKC PYCDFNSHGQ HGELPQQAYV DALLADLAQD MDYVQGRQLH TIFIGGGTPS LFDAKQIERL LLGVQALIPF ERDIEITMEA NPGTLEHDDF SAYRAAGVTR LSIGVQSFAK DKLNLLGRIH DQNEAVVAAQ KAKEADYLSF NLDLMHGLPN QSFSEAMHDI DTAVSLAPPH LSWYQLTIEP NTLFHSKPPQ LPDDEDLWQI YQQGQQKLAA LGYEQYEISA YAKPGFQCRH NLNYWQFGDY LGIGCGAHGK ITLMDETSVI RTVKIKHPKG YLASAETALS ANKSHEASPS TANKANHFAA SVTPILSEDM GLEYLMNRLR LMTPIPKTEF EQRTGQAHSS LDIGMAKAES RGLITQDETH WQLTSKGHMF VNDILSQFLD
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