| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2672 |
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| Symbol | |
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| ID | 4019189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3205850 |
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| End bp | 3206350 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637956716 |
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| Product | transcriptional activator RfaH |
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| Protein accession | YP_563674 |
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| Protein GI | 91794023 |
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| COG category | [K] Transcription |
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| COG ID | [COG0250] Transcription antiterminator |
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| TIGRFAM ID | [TIGR01955] transcriptional activator RfaH |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000489964 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTT GGTATTTATT ATATTGTAAG CCAAAGAGCG AGCTTAGAGC CCAGCAAAAC
TTGGCATTAC AGCAAGTTGA AAGCTACTTA CCTGTGATTA AAGAGCAAAA AACGGCCAGA
GGAAAAACCA AGGTCGTTGA AGTGCCGCTG TTCCCCAATT ACCTCTTCAT TCATTTTGAC
CCTACAGAAT TTAGCGTAAA CACCATTCAC TCGACTCGAG GGGCTAGCCG CATCATAGGT
TGCAAGGAAT TAATGACGCC AATTAACGAT GCCATCATAG CCGAAATCAA ACACAGGGTC
GGTAATCACC AAGTGGAACT TCAACCAGAA CTTGTTAAAG GCGATAGGGT GCGCTTTATC
CAGGGACCTT TCGCCGATTT GGATGCTATT TTCGAGGAGC ATAACGGTGA TAAACGCTGT
CATGTTTTGT TTACCATTAT GGGGCAGCAG AAGTCTTTAC AAGTGAATTT AGATCAGATA
GCGCCAAATG GGGAAGAATA A
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| Protein sequence | MKAWYLLYCK PKSELRAQQN LALQQVESYL PVIKEQKTAR GKTKVVEVPL FPNYLFIHFD
PTEFSVNTIH STRGASRIIG CKELMTPIND AIIAEIKHRV GNHQVELQPE LVKGDRVRFI
QGPFADLDAI FEEHNGDKRC HVLFTIMGQQ KSLQVNLDQI APNGEE
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