| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2671 |
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| Symbol | |
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| ID | 4019188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3202272 |
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| End bp | 3205031 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637956715 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_563673 |
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| Protein GI | 91794022 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTACACA AAACAAAAAC AATGTTAGTT GCCAGTGTCG CAGCACTATT CCTTTTGGGC
AGCCAGGCGC AAGCCGTGAC TCCTTCTCCG CAGATGATAG AGCAATTCAA ACAGTTGCCA
AAATCAGAAC AAGAACGTAT AGCGAAGCAA TATGGCATAG ATCCTTCAAT GTTGTCAGGG
GGCTCGCGCG GCACATCACA GCCCTTGGAA AATCCTAATC TTGTTAACTC AAGAGGTAAG
TTTGACAGTG AAAAAGCCTT AGAAGAAGAC AAAAAAATAG AATTTGATTT TAAGCAAGAT
AGCCAAAAAA ATGAGTTAAA ACGTTTCGGT TATGAAATGT TTGCCGGTGA ACCTACCACC
TTTGCGCCAG TTTCTGATGT GCCTGTACCC AGTGATTATA AAATTGGCCC TGGAGATGTG
CTTAAGGTTC AGTTATATGG CAAAGAAAAC CAAGAATACA GCCTAACGGT AGGTCGTGAT
GGCAGTGTGC AATTTCCAGA ATTGGGTCCA ATCCAACTGA GCGGCATGAG CTTTTCTGAA
GCAAGGGAGT CACTGCAGCA ACGTATTAAG CAGCAGATGA TTGGCATAGA GTCCAATATC
AGCATGGGTG AGCTGCGTTC AATCCGTATT TTTGTTGCGG GCGATGCTTA CAAGCCTGGT
TCTTATACCG TATCGAGTCT ATCCACTATT ACCCAAGCCT TGTTTGTGGC GGGCGGGGTA
AATGAGATTG GTAGTCTGCG TAATATCCAA GTAAAGCGTC ATGGCAAGTT AGTGGGTCAC
CTTGACTTAT ATGACTTGTT ATTAAGAGGC GATGCCTCTG GCGATATTAA CTTACGCTCT
GGTGATGTGG TATTTATTCC TGCAGTTGGT TCATTAGTCA GCGTCACCGG TGAAGTGCGT
CGCCCCGCTA TTTATGAAGT GGCTAATAAT GAAACTATAG GCGATATCGT CAATATGGCA
GCGGGCGTTA AAGCCGGTGC TTACGCACAA GCCACGAGTT TAGAGCGTTT TAATGATAAC
GGGCTAAAGA GCATTATCAA CCTTGACTTA ACCAAAGCTA AAGACAATCA GTTAAAAGCA
AAGGCGGGCG ATTATATTCG CGTTAAGACG GCTTCGAGTC AATTTGAGAA TAGCGTTACC
TTAGTTGGCG CAGTGGTTCG AGCGGGTAAG TATCAATGGC ACGAAGGGCT CAAAGTAAAA
GATATCATTC CTAGTGTGTG GGGCGATTTA GCGCCAACGG CGGATCTTAA TTATGCCTTA
GTGATCCGTG AAATAAATAA AAACGGCGAT ATTGAAGTGA TTCAATTTGG CCTTGGTGCT
GCCATTAGCG ATAGCAGTTT AAAAGATAAT CTAGTCTTAG CCCCTAGAGA TAAAATCTTA
GTTTTTAACT ATGACGATAC AACTCAAAAT CGCTTCGAGT TAAATAAGCT GGTTAAGGAA
AGAATTGCAA AGGTTGCTGA GCTTAAAGGT GATTCGTTAT TGGGAGATGA CTTATTTAAA
GCAGGCTTTG AAACCATCAA CTTTTCGGCC AAGAAAAAAC ATACCACTGC AGATATAGCT
GGCGTGGTGA TGACAGATAA AAATGATAAT CAGCAACAAG AGCAACAGCG GAAGGCGGTA
GCGAACGAAG TTTCTCAAAT GCTGGCTAAT TTATTCGATG ATGTTGAACT GGTAAGACTT
AGCAGCGTAA TGAGTCGCAA CGAATTACTT TATCCCATCA TTAATAAACT ATACCAACAG
GCAAACACAC AAAGCAGCAT ACAAATAGTC GCAGTTGCTG GAAAGGTGCG TCATCCAGGT
TTGTATCCAT TGAGCCAAAA TGGCAGTGTC ACTGACTTAA TCAAAGCCGC AGGTGGCTTA
ATTGAAGGCG CTTATATTAA AAAAGCTGAG TTAACTCGGA CAATTAATAG TGGCACAAGT
TCTGGGATAT CCCACATAAG CATAGACTTA CAAAGCGCGT TAATCGGCGA CCAGCAGGCG
AATGTCATGC TTGAAGGACG CGATGTGTTA ACGGTACAAA CTATTCCGGA TTGGCAAGAG
TCAAAAAGCA TTGAAATCCG TGGTGAAGTT AAATTCCCTG GTACCTATAA TATCGGCCGC
GGCGAGAGTT TAAGTGATGT GCTAGCCCGT GCTGGCGGTT TAACTGAATA TGCATCAGCC
AGTGGTGCTG TGTTTGTGCG TGAATCTGTG CGTCAGCAAG AGCAGCTCGA AATCAAAAAG
CTAGCCAATC AGCTTCGTCG AGATATAGCC AGCCGTGGTG TTTCTAAAGA TGGTTTGCAG
GTGAATTACA GTGAAGCCCA GTTGATGTTA ACCGATCTTG AGAATATCAA GGCGGTTGGC
CGCTTAGTGG TAGACCTTAA TGCCCTAAAC TTAGGGATTG AAGAAGCCGA TCTGCAGTTA
GAAGATGCCG ACGTGCTTTA TGTCCCCGCC GTGAAACAAA CGGTTGCAGT GATGGGCGAA
GTGCAGCACC CATCTACTCA CAGATTTAAG GCCGGTTTGA CACTGGATGA CTATTTAAAC
ATGTCTGGTG GCAGTCGTGA GCGTGGCGAT GACTCACGGA TTTATGTAAT CAAAGCCGAT
GGTTCGGTAA TGATGCCGCA AAATAGCTTG TGGTTTACTG CCGATACCAA CATAGATGCC
GGCGATACAG TCATAGTGCC ATTAGACACT GAGTACAAAG ACAACCTGAC CTTGTGGACG
CAAGTGACGG GCATCATCTA CAACACAGCT GTTGCCATCT CAGCGATATC TGGGCTCTAG
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| Protein sequence | MLHKTKTMLV ASVAALFLLG SQAQAVTPSP QMIEQFKQLP KSEQERIAKQ YGIDPSMLSG
GSRGTSQPLE NPNLVNSRGK FDSEKALEED KKIEFDFKQD SQKNELKRFG YEMFAGEPTT
FAPVSDVPVP SDYKIGPGDV LKVQLYGKEN QEYSLTVGRD GSVQFPELGP IQLSGMSFSE
ARESLQQRIK QQMIGIESNI SMGELRSIRI FVAGDAYKPG SYTVSSLSTI TQALFVAGGV
NEIGSLRNIQ VKRHGKLVGH LDLYDLLLRG DASGDINLRS GDVVFIPAVG SLVSVTGEVR
RPAIYEVANN ETIGDIVNMA AGVKAGAYAQ ATSLERFNDN GLKSIINLDL TKAKDNQLKA
KAGDYIRVKT ASSQFENSVT LVGAVVRAGK YQWHEGLKVK DIIPSVWGDL APTADLNYAL
VIREINKNGD IEVIQFGLGA AISDSSLKDN LVLAPRDKIL VFNYDDTTQN RFELNKLVKE
RIAKVAELKG DSLLGDDLFK AGFETINFSA KKKHTTADIA GVVMTDKNDN QQQEQQRKAV
ANEVSQMLAN LFDDVELVRL SSVMSRNELL YPIINKLYQQ ANTQSSIQIV AVAGKVRHPG
LYPLSQNGSV TDLIKAAGGL IEGAYIKKAE LTRTINSGTS SGISHISIDL QSALIGDQQA
NVMLEGRDVL TVQTIPDWQE SKSIEIRGEV KFPGTYNIGR GESLSDVLAR AGGLTEYASA
SGAVFVRESV RQQEQLEIKK LANQLRRDIA SRGVSKDGLQ VNYSEAQLML TDLENIKAVG
RLVVDLNALN LGIEEADLQL EDADVLYVPA VKQTVAVMGE VQHPSTHRFK AGLTLDDYLN
MSGGSRERGD DSRIYVIKAD GSVMMPQNSL WFTADTNIDA GDTVIVPLDT EYKDNLTLWT
QVTGIIYNTA VAISAISGL
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