| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2647 |
|---|
| Symbol | |
|---|
| ID | 4019164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 3178865 |
|---|
| End bp | 3179506 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637956691 |
|---|
| Product | putative acetyltransferase |
|---|
| Protein accession | YP_563649 |
|---|
| Protein GI | 91793998 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
|---|
| TIGRFAM ID | [TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATCCTG ATATCAACAG GGTTTTATAT ATCATTGGTG CCAGTGGGCA TGGAAAAGTC
ATTGCCGATC TTGCGGAGTT ACTCGGTTAT ACTGTCTATT TTTATGATGA TGCTTATCCA
GAGAAGCAGC AAATAGAGCA CTGGACTGTT CTTGGTACCT TTGACGATTT ATTGCAATTA
GAGCCGGACA AGATAAATGT CGCAGTTGCT ATTGGTAATA ATGTTATTCG GCAAGAAAAG
ATACTGCTGT GCGAAAAACA TCATTATCAA CTTCCTAGGC TCATTCACCC TAGTGCAATC
ATTAGTAAAT ATGCACAAGT AGGTACTGGA ACAGTTGTTC TTGCTGGGGC TGTAATTAAT
GCTTTTGCTA GGATTGGTCG TGGATGTATT ATTAATACAG CGTCAGTCGT TGAACATGAT
TGTATCATTA ATGATTTCGT GCATATTTCC CCTAATTCAG CTCTAGCAGG TTCCGTTTTC
ATTGGTGAGT GTTCATGGAT TGGCATTGGT AGTCAAATCA ATCAGTTAGT TAATGTTGAT
GAGCACGTGT TGATTGGTGC TGGAAGTACT GTTGTGAAAA ACATTCCTGC TAATGTCGTT
GCTTTTGGCT CGCCAGCTAA AGTTATTAGT CATAATCGTT AA
|
|---|
| Protein sequence | MDPDINRVLY IIGASGHGKV IADLAELLGY TVYFYDDAYP EKQQIEHWTV LGTFDDLLQL
EPDKINVAVA IGNNVIRQEK ILLCEKHHYQ LPRLIHPSAI ISKYAQVGTG TVVLAGAVIN
AFARIGRGCI INTASVVEHD CIINDFVHIS PNSALAGSVF IGECSWIGIG SQINQLVNVD
EHVLIGAGST VVKNIPANVV AFGSPAKVIS HNR
|
|---|
| |