| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2640 |
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| Symbol | |
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| ID | 4019157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3170174 |
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| End bp | 3171079 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956684 |
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| Product | S6 modification enzyme RimK |
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| Protein accession | YP_563642 |
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| Protein GI | 91793991 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.363149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATATCG CTATTATGTC ACGGAACAAA AATTTGTATT CGACACGTAG GCTCAAGGAA
GCGGCTATTG CTCGTGGCCA TGATGTCAAA GTGGTTGACC ATATCAGCTG CTACATGAAC
ATCAATATGA CCTCTCCAAG CATTCATATG AAAGGCGTCG AGTTGCCAAA ATTTGATGCG
GTTATTCCAC GTATTGGGGC TTCGGTGACC TTCTACGGTA CTGCGGTTCT GCGCCAGTTT
GAAATGATGG GGGTGCACCC GCTTAACGAG TCTGTGGCTA TCACGCGTTC ACGTGATAAA
TTGCGTTCAT TGCAGTTGTT ATCGCGTAAA AGCATAGGCT TACCCGTAAC AGGTTTTGCG
AACAAGCCTT CTGATGTGCC TGATTTATTA GACATGGTTG GCGGCGCGCC TTGCGTAATC
AAACTACTTG AAGGCACCCA AGGTATTGGT GTGGTGCTGG CCGAAACTCG CAAAGCGGCA
GAATCTGTGA TTGAAGCCTT TATGGGCCTT AAGGCCAACA TCATGGTGCA AGAATACATC
AAAGAAGCGG GCGGCGCAGA TATTCGCTGT TTCGTCATTG GCGATAAAGT GATTGCCGCC
ATGAAGCGTC AAGCTTTGCC TGGTGAATTC CGCTCTAACC TGCATCGCGG TGGCAGCGCT
ACGATTGTTA AATTGACTCC AGAAGAGCGC TCAACCGCCC TTCGTGCAGC CAAGACCATG
GGCTTAAATG TTGCTGGTGT TGATATTTTA CGCTCCAAAC ACGGCCCACT AGTGATGGAA
GTTAACTCAT CCCCAGGCCT TGAAGGCATC GAAAAAGCCA CAGGGATTGA CGTGGCCGAT
AAGATTATTC AGTTTATAGA AAAAAATGTA AAAGCGACCA GCACTAAGAC CAAGGGAGTC
GGTTAA
|
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| Protein sequence | MHIAIMSRNK NLYSTRRLKE AAIARGHDVK VVDHISCYMN INMTSPSIHM KGVELPKFDA
VIPRIGASVT FYGTAVLRQF EMMGVHPLNE SVAITRSRDK LRSLQLLSRK SIGLPVTGFA
NKPSDVPDLL DMVGGAPCVI KLLEGTQGIG VVLAETRKAA ESVIEAFMGL KANIMVQEYI
KEAGGADIRC FVIGDKVIAA MKRQALPGEF RSNLHRGGSA TIVKLTPEER STALRAAKTM
GLNVAGVDIL RSKHGPLVME VNSSPGLEGI EKATGIDVAD KIIQFIEKNV KATSTKTKGV
G
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