| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2608 |
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| Symbol | |
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| ID | 4019125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3122307 |
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| End bp | 3123635 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956652 |
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| Product | sugar (glycoside-Pentoside-hexuronide) transporter |
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| Protein accession | YP_563610 |
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| Protein GI | 91793959 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGTA TCAGAGAGAA AATAGCCTAC GGACTCGGGG ACACGGCCAG TAACATAGTG
TTCCAAACCG TGATGCTATT TTTAACTTTT TTTTATACCG ATATTTTCGG CATTTCACCG
GCATTTGTCG GCACCATGTT TCTAGCCGTG CGTTTAATCG ATGCCGTTAC CGATCCCTTA
ATGGGCGCAT TAGCCGACAG GACAAATACG CGCTGGGGTA AATTTCGCCC CTACCTGTTA
TGGTTTGCCC TGCCCTTCGG CTGTATCAGT GTCTTAGCCT TTACCACCCC AGAGTTATCT
GAAGACGGAA AAATGATTTA CGCTTTCGTC ACCTATACCG CACTAATGAT GGTCTATACC
GCAATTAACA TTCCTTACTG CGCATTAGGC GGGGTGCTGA CCGCGGATCC ACAGGAGCGG
GTATCGGTGC AATCCTACCG CTTCGTATTT GCTATGCTGG GCGGCTTATT AGTCTCAGGG
TTAACCTTAC CCTTAGTGGA TTTTTTAGGG CAAGGCGATG AGGCTAAGGG CTATCAACTG
ACCATAGCGG CCATGAGCAT ATTAGGTGTG GCTATGTTTT TAGCCTGTTT TTGGGGCACC
AAAGAGCGCT TACATCCCCC AATTAACCAA GCCTCCAGCT TTAAAAAAGA CTTCATCGAC
ATGCTCAACA ATGACCAATG GCGAGTGCTG GCCATTGCCG CCGTGTGTTT ATTGTCTGGC
ATGGTGTTAC GCACAAGCCT TGCCATTTAC TACGTTAAAT ATTTCCTCAA CATGCCCGAC
TCCATCACAC TCTTCATCAC CTTAGGCATG ATAGGCAACA TCTTCGGCTG CATGCTAGCC
GAGCCATTAG CAAAGCGTTT TTGCAAAGTT AAAGCCTACA TCAGCTTGCA GCTGCTGGCC
GCTGCAATCT GCATCATGAG TTACTTTGTG CCGAGCGACC AAGTGGTGCT GGCCTTTGGC
ATGTTTGTGA TATGGGGTTT CACCTTCAAC ATGGCGACCC CCCTGTTATG GGCAAAAATG
GCGGATGTGG TCGATTACGG TCAATATAAA AACGGCGTGC GTATTACCGG GATGATTTAC
TCATCGGTGA TTTTCTTTAT CAAACTCGGG GTGGCCATCG GCGGCGCAGC AGCGGGTTGG
TTACTCGCAG GCTATGGCTA TCAAGCAGGC GCAGTGCAGA CCCTCGATAC CCAAGAAGGT
ATTTTATTGT CCTTTACCCT ATACCCTGCC ATAGGCTCGA TAGTGGTGGC CTTGGTGATG
CGTTGGTACA GCTTAGACAA TCAAAAAGTG CAGCAAATCC ATTTAGAATT AAATAGAGAA
GCAAAATAA
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| Protein sequence | MISIREKIAY GLGDTASNIV FQTVMLFLTF FYTDIFGISP AFVGTMFLAV RLIDAVTDPL
MGALADRTNT RWGKFRPYLL WFALPFGCIS VLAFTTPELS EDGKMIYAFV TYTALMMVYT
AINIPYCALG GVLTADPQER VSVQSYRFVF AMLGGLLVSG LTLPLVDFLG QGDEAKGYQL
TIAAMSILGV AMFLACFWGT KERLHPPINQ ASSFKKDFID MLNNDQWRVL AIAAVCLLSG
MVLRTSLAIY YVKYFLNMPD SITLFITLGM IGNIFGCMLA EPLAKRFCKV KAYISLQLLA
AAICIMSYFV PSDQVVLAFG MFVIWGFTFN MATPLLWAKM ADVVDYGQYK NGVRITGMIY
SSVIFFIKLG VAIGGAAAGW LLAGYGYQAG AVQTLDTQEG ILLSFTLYPA IGSIVVALVM
RWYSLDNQKV QQIHLELNRE AK
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