Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2607 |
Symbol | |
ID | 4019124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3120885 |
End bp | 3122216 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637956651 |
Product | Beta-glucosidase |
Protein accession | YP_563609 |
Protein GI | 91793958 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.776876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAT CCTTACCAGC CGATTCAAAC ATGCATTCAA CCTCGTTTAT TTATGGGGTG GCGACGGCCT CATTCCAAAT CGAGGGTGGA GTCGACTCAC GCCTGCCCTG CATCTGGGAT ACCTTTTGTG CCACAGAAGG TAACATTCGT GATGCATCCA ATGGTGAACA CGCCTGTGAG CACTTAAAGT TATGGCGTGA AGATGTCGAC CTCATCGACT CATTAGGGGT CGATGCCTAT CGATTATCCA TTTCTTGGCC ACGGGTGTTG CATAAAGACG GCAGCTTAAA CCCTCAGGGC GTTAACTTTT ACATCGACCT GCTTGATGAG CTCAATCGCC GTGGCATTAA GGCCTTTGTG ACCTTATATC ACTGGGATTT GCCCCAGCAT ATTGAAGATA ATGGCGGTTG GTTAAATCGT GACACTGCGT ATTTATTTGC CGATTACGCC GACAAAATAA GCCAGGCATT TGGCGACCGA GTTTATTCCT ATGCCACCTT TAATGAGCCC TTTTGCAGTT CATACTTAGG CTATGAAATT GGTATTCATG CCCCTGGATT GGCTAAAAAA TCCTACGGCC GACAATCGGC CCACCATTTA TTACTGGCTC ACGGCTTAGC CATGAAGGTG CTGCAAAAAA ACAGCCCCAA TAGCCAAAAT GGTATCGTGC TCAATTTTAC TCCTTGTTAT AGCGCCACAG ATGCCGCCGC AGATATCCGC GCCGCCAAGC AAGCCGATGA GTATTTCAAT CAATGGTACA TTAAGCCGTT GTTTGACCGT TGTTACCCCG ATATTATCGA GGATTTGGCC AGTGAAGACT TGCCAAGCAT TGAAGAGGGA GATTTTGATA TCATCGCCCA GCCGCTGGAT TTCTTAGGGA TTAACTTCTA TACCCGCGCA GTCTATAAAG CCGATGAAAA AACAGGATTT AGCCAAGTCG ACATGCAAAA TGTGCCTAAA ACCCAGATGG GCTGGGAGAT TTACCCCCAA GCCTTTACCG ATTTATTGAC TTCTCTCAAT GCACTATATC CACTGCCTCC TGTCTACATC ACAGAGAATG GCGCGGCGAT GGACGATAAA CTGCAAAACG GTAACGTGGA TGATCAAGAC AGACTGCAAT ACTATAATGC TCACTTGAAT GCCGTGAATA ATGCCATCGA ACAAGGGGTG AATGTGATTG GCTACTTTGC CTGGAGTTTA ATGGATAATT TTGAATGGGC TGAAGGCTAT TTAAAACGTT TCGGGATTGT CTATGTTGAT TATCAAACCC AGCAGCGAAC CCTAAAAGCC AGTGCCCACG GCTACCGTGA CTTTATACAA GCAAGAAAAT GA
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Protein sequence | MKISLPADSN MHSTSFIYGV ATASFQIEGG VDSRLPCIWD TFCATEGNIR DASNGEHACE HLKLWREDVD LIDSLGVDAY RLSISWPRVL HKDGSLNPQG VNFYIDLLDE LNRRGIKAFV TLYHWDLPQH IEDNGGWLNR DTAYLFADYA DKISQAFGDR VYSYATFNEP FCSSYLGYEI GIHAPGLAKK SYGRQSAHHL LLAHGLAMKV LQKNSPNSQN GIVLNFTPCY SATDAAADIR AAKQADEYFN QWYIKPLFDR CYPDIIEDLA SEDLPSIEEG DFDIIAQPLD FLGINFYTRA VYKADEKTGF SQVDMQNVPK TQMGWEIYPQ AFTDLLTSLN ALYPLPPVYI TENGAAMDDK LQNGNVDDQD RLQYYNAHLN AVNNAIEQGV NVIGYFAWSL MDNFEWAEGY LKRFGIVYVD YQTQQRTLKA SAHGYRDFIQ ARK
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