| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2578 |
|---|
| Symbol | |
|---|
| ID | 4019095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 3086882 |
|---|
| End bp | 3088030 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637956622 |
|---|
| Product | iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_563580 |
|---|
| Protein GI | 91793929 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTA AATTTTATAT TCCCAGTGTT AACATTTTAG GCCAGGGCGG CGTTGACGAT
GCCATAGAAG ATATTAAAAC CCTTGGCTTT AAACGCGCAT TGATTGTGAC TGACAAGCCA
TTAGTTAAGA TTGGCTTGGT GGAAAAAGTG GCAACTAAGT TGGTTAATAA TGGCATCAAA
GTCTTTTTGT TTGATGGTGT ACAACCCAAC CCCACTACAG CCAATGTGGA CGCAGGCCTT
GGTATTCTAA ACGATAATCA CTGTGACTTT ATTATTTCCT TGGGCGGCGG TTCTCCCCAC
GATTGCGCTA AGGGTATCGC CCTAGTGGCC ACTAATGGCG GCAAAATCAA AGACTATGAA
GGGGTCGATG TCTCCACTAA GCCGCAACTT CCACTTATCG CCATTAACAC CACAGCAGGC
ACCGCCAGTG AAATGACCCG TTTTTGCATC ATCACAGATG AACATCGTCA TATTAAGATG
GCCATAGTGG ATAAAAACAC CACCCCAATA TTGTCGGTGA ACGATCCTGA ATTGATGCTT
GAAAAGCCCG CTCAATTAAC CGCGGCAACC GGTATGGATG CACTCACTCA CGCTATCGAA
GCTTATGTCT CCATTGCAGC CACTCCCATT ACAGATGCTT GTGCTATCAA GGCCATCGAG
CTTATTCAGG CAAACCTCAT CGCAGCAGTC AATGACGGTA AGAATATGCA GGCCCGTGAG
CAAATGGCTT ATGCTCAATT CTTAGCCGGC ATGGCGTTTA ACAATGCAAG CCTAGGTTAT
GTTCATGCTA TGGCTCATCA GTTAGGCGGG TTTTACGACC TGCCTCATGG TGTGTGCAAT
GCGCTATTAT TGCCCCATGT ACAGGAATAC AATGCACAAG TGGCGGCACC TAGGTTAAAA
GATGTCGCCA AAGCCATGGG GGTTGATGTT AACGCCATGA CAGATGAGCA AGGCGCTAAA
GCCGCCATCA CAGCGATTAA GTCTTTAGCT GTGGCTGTGG ATATTCCGGC GAATTTAACC
TTGCTTGGCG TGAACGCCGC AGATATTCCA ACCTTGGCCG ATAACGCCCT CAAAGATGCC
TGCGGTTTTA CCAATCCAAA ACAAGCGAGC CATGAGGAAA TCTGCCAGAT TTTCACTAAT
GCGCTTTGA
|
|---|
| Protein sequence | MATKFYIPSV NILGQGGVDD AIEDIKTLGF KRALIVTDKP LVKIGLVEKV ATKLVNNGIK
VFLFDGVQPN PTTANVDAGL GILNDNHCDF IISLGGGSPH DCAKGIALVA TNGGKIKDYE
GVDVSTKPQL PLIAINTTAG TASEMTRFCI ITDEHRHIKM AIVDKNTTPI LSVNDPELML
EKPAQLTAAT GMDALTHAIE AYVSIAATPI TDACAIKAIE LIQANLIAAV NDGKNMQARE
QMAYAQFLAG MAFNNASLGY VHAMAHQLGG FYDLPHGVCN ALLLPHVQEY NAQVAAPRLK
DVAKAMGVDV NAMTDEQGAK AAITAIKSLA VAVDIPANLT LLGVNAADIP TLADNALKDA
CGFTNPKQAS HEEICQIFTN AL
|
|---|
| |