| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2566 |
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| Symbol | |
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| ID | 4019083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3070460 |
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| End bp | 3071920 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637956610 |
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| Product | thiamine biosynthesis protein ThiI |
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| Protein accession | YP_563568 |
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| Protein GI | 91793917 |
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| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase
[COG0607] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.813354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTA TCGTAAAGTT ATACCCAGAA ATCATGATGA AGAGTAAGTC GGTGCGCTCG
CGTTTTACTA AAATGCTTGA GACCAACATA CGCAATGTCC TTAAAAAAGT TGATGAAGAT
GCCAAAGTGC AGCGTCAATG GGACAGGATC ATGGTTAGAG TACCGGCAGA TAGACCTGAA
TTGGTGGATG CCTTCGCCGA GCGTTTAGGC TGCATTCCGG GTATCGCCCA CGTAGTGCAA
GTGAATGAAT ACACCTTTGA TTCAGTCGAT CATATCTACC AGCAAGTGCT GCCTTTATAT
CGTGAGCAAC TTGCGGGTAA GACCTTCTGT GTTCGCGTTA AGCGCACTGG TCAGCACGAT
TTTAAATCCA TCGAAGTTGA GCGTTATGTC GGCGGCGGCT TAAATCAGCA CACCGATGCG
GTTGGGGTAA AACTTAAAAA CCCAGATTTA ACCATTAACC TAGAAATCGA CCATGAGAAG
CTATACATGG TGGTGCGCCG CATCGAAGGT TTGGGCGGTT TTCCTATGGC CACTCAAGAA
GATGTGCTGT CGCTCATTTC TGGTGGTTTT GACTCAGGGG TTTCAAGCTT TCAGTTCATT
AAGAAAGGGG CCCGTACCCA TTATTGTTTC TTCAACCTTG GCGGCTCACA GCATGAGATT
GGCGTTAAGC AGGTGGCTTA TCACCTGTGG AAAACCTATG GTGAATCTCA TAAGGTGAAG
TTTATCTCTG TGCCGTTCGA AGGTGTGGTG CAAGAAATTC TTGAACGTAT CGACAACGGT
CAAATGGGAG TTATTCTAAA GCGGGTGATG ATGCGCGCTG CGACCTTGCT GGCGGATAAA
TACGGCATTC AAGCATTAGT CACAGGTGAG AGCCTAGGTC AGGTATCGAG CCAGACATTG
ACCAATTTAA ACGTGATTGA TAGATGCACA GATTTGTTAA TCTTGCGTCC TTTAATCGCC
ATGGACAAGC AAGATATCAT CAACCAGAGC CGCATTATTG GCACCGAAGA TTTTGCAAAG
TCTATTCCTG AGTATTGTGG CGTGATTTCT CAAAAGCCAA CGGTGAAAGC CGTATTGTCC
AAGATTGAAG CCGAAGAACT TAAGTTTTCT GAAAACTTAA TTGAAAACAT AGTGGCTCAA
GCGAAAGTCA TCGATATTAA AGATATCGCC ATCGAAATGG ACAACCAAAT CGCGGCCGCC
GAAGCAGAAA CTGTAGTTGC TGTGGACACG CAAGAAGTGG TTATCGACAT TCGCGCTCAG
GAAGAAGAAG AGAAAAACCC GTTGAGCCTG CCCGGCAAAA CTGTGATGAC TATCCCTTTC
TTTAAACTGT CTACTCAGTT TGCAGACTTA GACAAATCAG TCACTTATTT GCTTTATTGT
GAGCGCGGCG TGATGAGTAA GCTTCAGGCT CTATACTTGA TTGAGCAAGG TTACACTAAC
GTTAAGGTGT ATCGTCCTTA A
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| Protein sequence | MKFIVKLYPE IMMKSKSVRS RFTKMLETNI RNVLKKVDED AKVQRQWDRI MVRVPADRPE
LVDAFAERLG CIPGIAHVVQ VNEYTFDSVD HIYQQVLPLY REQLAGKTFC VRVKRTGQHD
FKSIEVERYV GGGLNQHTDA VGVKLKNPDL TINLEIDHEK LYMVVRRIEG LGGFPMATQE
DVLSLISGGF DSGVSSFQFI KKGARTHYCF FNLGGSQHEI GVKQVAYHLW KTYGESHKVK
FISVPFEGVV QEILERIDNG QMGVILKRVM MRAATLLADK YGIQALVTGE SLGQVSSQTL
TNLNVIDRCT DLLILRPLIA MDKQDIINQS RIIGTEDFAK SIPEYCGVIS QKPTVKAVLS
KIEAEELKFS ENLIENIVAQ AKVIDIKDIA IEMDNQIAAA EAETVVAVDT QEVVIDIRAQ
EEEEKNPLSL PGKTVMTIPF FKLSTQFADL DKSVTYLLYC ERGVMSKLQA LYLIEQGYTN
VKVYRP
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