Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2560 |
Symbol | |
ID | 4019077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3062662 |
End bp | 3065631 |
Gene Length | 2970 bp |
Protein Length | 989 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637956604 |
Product | peptidase S9, prolyl oligopeptidase active site region |
Protein accession | YP_563562 |
Protein GI | 91793911 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATCGCT ACTCAATTCT TAGGCCCCAT TGGTCTAAAT TGCTCCTCTT AGGTTTATTC GCTTGTGCAA GCGGCTTAGC TCAACCAAGT GTATCGCTAG TGGGGGCAGA AACTGTCAAT GCTCAAGGTT TGCAAGGGAG CACCAGGCCC TTAACCTTAG AGGACATCAT GCATTATCAA ACCCTGAAAT TGCCGCAATT GTCTGACAAT GGGCAATTAT TAGCGGTTGA GGCAAAGCCT GACAGGGGAG AGAGTCAGGT ATTGATTAAG CCTTTGGGTC ATGGCGAGCC TAAGCGAGTG AAGGGCAGCA AGCCACAAGT GAATGCTGAT GGCAGTTTTG TACTCATTAG CCAAGAGCCT AGCTTACTTG AGCGTGAAAC CTTAGAAAAA GCGCAATTAA CCACTCGGGC CGTATTGCTT GATAGCCAGA CAGGCACTGA GCAGGTTTTT GAACATGTAA AACAGGCGAG ATTTAGCCCA GATGGCGCCT ATGCCTTGAT TTGGTTTGAA GAAGATAAAA CCAAAACTGA ACATAAAATT GATAACGACA TTCATAATGA GCCAGATGGG AGCATTGCCC CTAATGCTAA ACCTAGTTCT AAGCTTAGCG CTAAAAGCAA AGCAGCAACG TCGGCAAACA CTAAAACCGC CAAGGCCGAT AAAGAGTTAG CTGAAAGTGA ATTACTGCTT ATTCGCTTAA CTGACAACAA ACAGCATAGG TTTTCTCAAG TTAGTGTGTT TGCCATGGGC GAAAATGCCA AAGGCCTGTT ACTGGCTCAG GGGCTCACTG ATTGTAAAGA CGGCAAGGAT AGCGCAAGTG AAACCCTCGC TGCTAAATGC AACGGCCAAC AATTGCTATT TGTGGATTTT GCATCCTTTA AGATAACGCC TTTATTTAAC AGTAACACTC ACAGATTTGG CGCATTAGCG TTAGCGGATG ACTTAAGTTA TGGGGCATTT ACCTTAGGGA ATAGCCTTGA GCTTAGATCT GTGCGTGAAT ATCAATTACA CCGAATAGAT ATTGCCAGTG GTCAAAAGAC TGCAGCACCA AAAGACACGA CATGGCTTTA TAATCAGTAT TCTAGCTTAG TCTTTTCTCA AGACAATCAA CGTTTGTTTG TTGGACGAGT GCCTAACATA AGGGCATTAG CTCAAAAGCC AAAACTTGAT ACCCAAGCTA AATTATTCGA TAAGGCCCTT ATTCAAGCTA ACAGCCAAGG CAATGTTTGG CACGGTGATG ATAGAAAAAT TAAACCCCAT GAAATTCATG ATTATGAAAA GTCATTGAAA AAAACCTACC TTGGGGTTTG GCACATGAGT AGCGAGAGAT TGTTACAAAT CGCCAACGAG CAGTTGCCTG AGGTTAAAGC TGGCCAGCAA AGCCGATTTT TACTGGCAAG TTCTGACATA CCTTATCAAA AGATGATCAC TTGGGCGGGG TTCTTTCGTG ATTGGTCAGT GGTCAATCTT AATACTGGCA AAGCCACAGA AGTACTGGTT CAGCACCCAA GTGACTCCCC TATGAGCCTG TCACCGGATG GCAAGCAGCT TATTTATTTC AAGCAAGGTC AGATTTGGCT CTATAGTCTG ATGAGCCAGC GGCACACCAA TTTGTCGGCC AAGATAGCCA CGCCCTTTAG TGATGAAGAT CATGACTACC CCTCGGCGGC GCCAGGCTAC GGATTTGGTC CTTGGCTTGC CGATAGCTCA GCCGTGTTAG TGTATGATAA ATACGATATC TGGCAGTTTA GCAGCCAAGG CTCAAAAGCC ATTAACCTGA CAAATGCACA AGGCCGTAAG CAGCAATTAC AGCTTAGGGT GAAAGCACTG GTTAACGATA AAAGTCGCCA AGCTGTGGTG AATAAAGGGG ATACACTATT ACTGCAGGGC TATAACGAGC GCACTAAAGC CGATGGTTTT TATCAGGCCA AAGTCGGGAA AACCGGGCTC AGTGTTGTCG TGGAAGGGGA TCATAAGTTG ACAGTTTTGG CCCGCAGTAA AAACACGGGG CAGTTTTTGT TCTCAAAAGA AAGGTTTGAT TTGTATCCCG ACCTCTATAG CGCAGATATT AATGCGCCAG CGACTTGGAC ACAGCAGACG TTTCTTGCCA AGCAGCAAGC CCCTTTTACT TGGGGGAATG CTGAATTAGT GCAGTGGACC AATGATAGCG GCAAGCGCTC GGATGGTGTG CTGATTAAGC CAACTCACTA TCAAGCGGGT AAGGCTTACC CTGTCATAGT GTATTTTTAC CGCTTTATGA GCGACAGATT ACATGACTAT CCCGATATGG CCATAAACCA CAGGCCTAAC TTTGCTTGGT ATGCCGACAA TGGTTATGCC ATCTTCTTAC CGGACATTCG CTTTGAAGAG CAATACCCGG GTCTATCGGC GGTTAAAGCG CTCACTTCTG GGGTACAGCA TCTTATCGAT ATGGGCATAG CTAAAGCCGA CGCCATAGGG CTACATGGTC ACTCATGGGG CGGCTATCAA ACAGCCTTTG CTGTGACTCA AACCCCCTTG TTTAAGGCGG CAGTGGCAGG GGCGCCTGTT GCAAACATGA CCAGTGCCTA TTCTGGGATC CGCCATGGCA GTGGACTTGC TCGGCAGTTT CAATATGAAA CCGGCCAGAG CCGCATGGGC CAAAGTTTGA TGGATATTCC GCTGCGTTAC ATGGAAAACT CGCCGGTATT TTATGTTAAG CGAGTCACTA CTCCTTTGAT GATCATGTTT GGTGATAAAG ACGACGCCGT GCCTTGGGAA CAAGGAGTTG AATTATATTT GGCCATGCGC CGCGCCGGCA AAGCCGTGGT CTTTTTGCAA TATGAAGATG AGCCGCACCA TTTGAAAAAG TACCCCAACA AGCTCGATTA CAGTATCAAG ATGATGCAGT ATTTCGATCA TTACCTTAAA GGTTTACCCG CGCCAGACTG GCTTAAACAG GGGCAAGCCT ATCAAGAGTA TCGTGACTAG
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Protein sequence | MNRYSILRPH WSKLLLLGLF ACASGLAQPS VSLVGAETVN AQGLQGSTRP LTLEDIMHYQ TLKLPQLSDN GQLLAVEAKP DRGESQVLIK PLGHGEPKRV KGSKPQVNAD GSFVLISQEP SLLERETLEK AQLTTRAVLL DSQTGTEQVF EHVKQARFSP DGAYALIWFE EDKTKTEHKI DNDIHNEPDG SIAPNAKPSS KLSAKSKAAT SANTKTAKAD KELAESELLL IRLTDNKQHR FSQVSVFAMG ENAKGLLLAQ GLTDCKDGKD SASETLAAKC NGQQLLFVDF ASFKITPLFN SNTHRFGALA LADDLSYGAF TLGNSLELRS VREYQLHRID IASGQKTAAP KDTTWLYNQY SSLVFSQDNQ RLFVGRVPNI RALAQKPKLD TQAKLFDKAL IQANSQGNVW HGDDRKIKPH EIHDYEKSLK KTYLGVWHMS SERLLQIANE QLPEVKAGQQ SRFLLASSDI PYQKMITWAG FFRDWSVVNL NTGKATEVLV QHPSDSPMSL SPDGKQLIYF KQGQIWLYSL MSQRHTNLSA KIATPFSDED HDYPSAAPGY GFGPWLADSS AVLVYDKYDI WQFSSQGSKA INLTNAQGRK QQLQLRVKAL VNDKSRQAVV NKGDTLLLQG YNERTKADGF YQAKVGKTGL SVVVEGDHKL TVLARSKNTG QFLFSKERFD LYPDLYSADI NAPATWTQQT FLAKQQAPFT WGNAELVQWT NDSGKRSDGV LIKPTHYQAG KAYPVIVYFY RFMSDRLHDY PDMAINHRPN FAWYADNGYA IFLPDIRFEE QYPGLSAVKA LTSGVQHLID MGIAKADAIG LHGHSWGGYQ TAFAVTQTPL FKAAVAGAPV ANMTSAYSGI RHGSGLARQF QYETGQSRMG QSLMDIPLRY MENSPVFYVK RVTTPLMIMF GDKDDAVPWE QGVELYLAMR RAGKAVVFLQ YEDEPHHLKK YPNKLDYSIK MMQYFDHYLK GLPAPDWLKQ GQAYQEYRD
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