Gene Sden_2533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2533 
SymbolgltX 
ID4019042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3027216 
End bp3028637 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content44% 
IMG OID637956570 
Productglutamyl-tRNA synthetase 
Protein accessionYP_563536 
Protein GI91793885 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.8789e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACTC CCGCGATAAC TAAAACGCGT TTTGCTCCTA GCCCAACCGG CTTCCTTCAT 
GTTGGCGGTG CCCGTACAGC ACTTTATTCT TGGCTTCAGG CTCGTGCTAA TAATGGTGAA
TTTGTGCTCC GAATCGAAGA CACAGATATC GAGCGTTCAA CACAAGCGGC TTGTGATGCC
ATTCTTGATG GTATGAACTG GTTAGGTTTG ACTTGGGACG AAGGTCCTTA TTACCAGACA
AAGCGTTTTG ATCGTTACCA TGAAATCATC GGCCAAATGC TAGAAAAAGG CACTGCCTAT
AAATGTTATT GTTCACGCGA GCGCATTGAA ACCATGCGTG AAGAACAAGC TGCTGCGGGA
TTACAACAAA AATATGATGG CCATTGCCGC AACCTTGCAG CAAGAGAAAC TAACGAGCCG
TTTGTTATAC GCTTTAAAAA CCCGTTAGAG GGCAGTGTCG TTTTTGACGA TCATGTGCGC
GGCCGCATCG AAATATCTAA CGAAATGTTA GATGATTTAA TTATCCAACG TACCGATGGT
GTGCCTACTT ACAACTTCTG TGTGGTCGTT GATGATTGGG ACATGGGTAT TACTAGCGTT
GTGCGAGGTG AAGATCACAT TAACAATACG CCACGTCAAA TCAATATTCT TAAAGCGCTC
GGGGCGCCTA TCCCTGAATA TGCCCATGTG TCTATGATTT TAGGCGACGA CGGCGCTAAG
CTATCCAAAC GCCACGGCGC TGTTGGTGTA ATGCAATACC GTGATGACGG TTATTTACCC
GAAGCCCTGT TGAACTATTT AGTGCGCTTA GGTTGGTCTC ATGGCGACCA AGAAATCTTC
TCAATGGAAG AAATGAAGCA GCACTTTAAA CTGGGCGACA TTAACAAAGC AGCATCCGCC
TTTAACACAG ATAAGCTTAT TTGGTTAAAT CAACACTATA TTAAGACCCT TGACCCAGAA
TATGTCGCAA GTCATTTAGC TTGGCATATG GAAGATCAAA ACATTGATAC CAGCAATGGT
CCAGCCCTAG CTGAGATAGT GACCGCACTT TCTGAGCGCG CCAAAACATT AAAAGAACTG
GCCGAATCGA GCCGTTATTT CTTTGAAGAC TTCACTGACT TTGATGAAGT TCAAGCTAAA
AAGCATTTAC GCGGCGTGGC CCTTGAGCCG TTAACCTTAG TTAAGACTAA ATTAGCAGCC
TTAACTGAAT GGTCTGTCAG TGTAATTCAT CAAGTAATTG AAGATACCGC CACTGAACTT
GAGGTTGGCA TGGGTAAAGT AGGTATGCCA CTGCGTGTTG CTGTAACAGG TGCAGGCCAG
TCGCCTGCTC TAGATTTAAC CTTGTTTTTA ATTGGAAAAG ACAGATCTGA GCAAAGAATA
TCCAAAGCGA TTGATTTTGT AGCAGATAGA ATAAATTCCT AA
 
Protein sequence
MTTPAITKTR FAPSPTGFLH VGGARTALYS WLQARANNGE FVLRIEDTDI ERSTQAACDA 
ILDGMNWLGL TWDEGPYYQT KRFDRYHEII GQMLEKGTAY KCYCSRERIE TMREEQAAAG
LQQKYDGHCR NLAARETNEP FVIRFKNPLE GSVVFDDHVR GRIEISNEML DDLIIQRTDG
VPTYNFCVVV DDWDMGITSV VRGEDHINNT PRQINILKAL GAPIPEYAHV SMILGDDGAK
LSKRHGAVGV MQYRDDGYLP EALLNYLVRL GWSHGDQEIF SMEEMKQHFK LGDINKAASA
FNTDKLIWLN QHYIKTLDPE YVASHLAWHM EDQNIDTSNG PALAEIVTAL SERAKTLKEL
AESSRYFFED FTDFDEVQAK KHLRGVALEP LTLVKTKLAA LTEWSVSVIH QVIEDTATEL
EVGMGKVGMP LRVAVTGAGQ SPALDLTLFL IGKDRSEQRI SKAIDFVADR INS