Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2531 |
Symbol | |
ID | 4019034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3022129 |
End bp | 3023766 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637956562 |
Product | Ada, metal-binding |
Protein accession | YP_563534 |
Protein GI | 91793883 |
COG category | [F] Nucleotide transport and metabolism [L] Replication, recombination and repair |
COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [COG2169] Adenosine deaminase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.645313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACTC GCAATGAAGT TCAAGGGCCA CATGAAAATA ACTGCGTGAT AAGCCCAAGT GTATGCCTGC AAGCTAGACT CAGCCGCGAT GCAAGGTTTG ACGGTCAGTT TTTTACCGGG GTATTTTCGA CGGGTATTTA TTGCCGTTCT ATATGCCCAG CGCCGCCTCC ACTTGAGAAA AACGTGCGCT ATTTTGATTC TGCCATTCAG GCTGCCAATG CCGGGCTGAG GCCTTGCCTG CGTTGTCGCC CCGACAGTGC GCCGCATTCA CATGCTTGGC TTGGTACTCA AACCAGCTTA AAACGTGCCA TTAGTCTGAT AGAACAAGGC TATTTACGTG GTGATAACTC AGGCTCTGTG GAGTCGTTAG CGCTGAAGTT GGGGATTTCG AGCCGTTACT TAGCCAAGCT CTTTAACCAA GGTCTGGGAA CGTCGCCCAA GCGCTTTGCC TTGTATCAAC AGTTGATGTT TGCCAAGCAA TTGTTACATC AAACTCAGTT ACCCATAACA CAAGTTGCAA TGGCCGCAGG CTTTAATAGC TTACGGCGCT TTAATGAAGT GTTTCAGCAA GAATTGCAAC TGACGCCAAC GGCGCTACGC AAAGTGTCAG CCAAGGCCCA AACAAATACT CGCAACAATA AGGATGCAGA GGGGGCAATA ACCCAAGAGA TTTGCCTGTC GCTGGCATTT CGCCCGCCGC TCAATTGGCA CAAAATGTGG GCGTTTTACC AATTTCGTCA AGTGAGCGGC ATGGAAATTT TAGATGAAGA ACAAGGCTAC AGCCGCAGCT TTTGCTTCGA TGGGGTAAAA GGCGTGTTCA GGGTGCGTCT CAATGAAGCT AAGTCGCAGT TCGACACCCA AATTTATTTA CTGCACAGCC ATGATGTTAA GCAATTACAC CCAGTGGTAT TGAGGATAAG GCGTCTGCTC GATTTAGATA CTGATATGGC GACGATAGCG CAGATCTTTG TTCCGCTTGT TGCCATGGGG GCAAAGCTTG ATGCTGGTTT ACGCATTCCA GCGACCGCAA GCGTGTTTGA GGCAGCGTGC CGAGCCATAT TGGGTCAACA GGTTAGCGTG CAACAAGCCA CTAAATTACT CAATACGCTG GTTGAACATT ATGGCGAAAC CTTTGAGCTT AATGGTCAAG TTTGGCGCTT ATTTCCAACA CCTGAAGCCG TGGCTACAGC GAGTCTCGAT GAATTAAAAA TGCCAGGTGC GCGCAGGCTT GCCCTCAATG CCCTTGGCGC TTATGTGCAA GAGCACCCAC ATTCCACCCC AGATGATTGG CTTGAGGTTA AAGGCATTGG CCCTTGGACT GTGGCCTACG CTAAGATGCG TGGCTTAAGT GAGTCCAATG TGTTTTTAAG TTCAGACTTA GTGATTAAGC ATAGAATTCA CGGGCTATAC GCTAAGGCGG GGGGAATCAT TGAAACCCCA AAAGCGTATT TAGCCTTGGC GGCTGACATA GCCAATAAGG TGTCACCTTG GGGCAGTTAT CTCACCTTTG GCCTATGGGA TGATGAAGAT CTAATGACGA GTAAGAAAGA GTCGAGCAAG CATGTGGTTT GCAAAAAAGT CATTAACACT AAACAACCTA GCCAGAAAGT GTCAAACAAA AAGGAAGCGC TCAAATGA
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Protein sequence | MATRNEVQGP HENNCVISPS VCLQARLSRD ARFDGQFFTG VFSTGIYCRS ICPAPPPLEK NVRYFDSAIQ AANAGLRPCL RCRPDSAPHS HAWLGTQTSL KRAISLIEQG YLRGDNSGSV ESLALKLGIS SRYLAKLFNQ GLGTSPKRFA LYQQLMFAKQ LLHQTQLPIT QVAMAAGFNS LRRFNEVFQQ ELQLTPTALR KVSAKAQTNT RNNKDAEGAI TQEICLSLAF RPPLNWHKMW AFYQFRQVSG MEILDEEQGY SRSFCFDGVK GVFRVRLNEA KSQFDTQIYL LHSHDVKQLH PVVLRIRRLL DLDTDMATIA QIFVPLVAMG AKLDAGLRIP ATASVFEAAC RAILGQQVSV QQATKLLNTL VEHYGETFEL NGQVWRLFPT PEAVATASLD ELKMPGARRL ALNALGAYVQ EHPHSTPDDW LEVKGIGPWT VAYAKMRGLS ESNVFLSSDL VIKHRIHGLY AKAGGIIETP KAYLALAADI ANKVSPWGSY LTFGLWDDED LMTSKKESSK HVVCKKVINT KQPSQKVSNK KEALK
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