| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2503 |
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| Symbol | |
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| ID | 4019006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2985319 |
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| End bp | 2987553 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956534 |
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| Product | TonB-dependent haem/haemoglobin receptor |
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| Protein accession | YP_563506 |
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| Protein GI | 91793855 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.955771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCACC CAGATCTACT CTCCCGTCAA AATCACAATG TAAGCCCCAG TACCCTCGGC
CTTACATTAG CCTGTATTCT TGGCAGTTTT CCCTGCCAAG TGTTAGCCGG TAATGTGCTT
GGCGTCCCTA AAGTCACCGG AATTGAAGTC ATTGAAGTCA GCGGTATTCA ACATCGCCGC
CCGATGGCAA TTGTCACCCC AGGGGAAGCG CTTATTACAA TGGAGCAGCT GGAGGAAATG
CAGGCTTCGA GCTTTGCAGA AGTTATCGAT GATATGGCAG GTGCACATAT TGATGGTGGT
ACTCGTAGTG GCGGTGAGCG GATAAATATT TGGGGCTTTG GCGAGACAGA GGACTTAAAT
GTCTATGTGG ATAATGCGCC AGTGGGCTTT GAGCAATATC GCTACGGTTC ATTCTTTATT
GACCCTGATT TACTCAAGCA AGTGGAAGTG ATTAAAGGTG CCCATGATGT ACGCTCGGGT
AACGGGGGTT TTGGTGGCGC GATTTACGCT GTCACTAAGT CTGCGAGTGA TTTTCTTAAA
CACGATCAAA GCTTTGGTTC TAGAGTCAAA GCCAGTTATG CCAGCAACAA TGAAACAAAA
GGTTATACCG CAACTAGCTA TGCAACATTT AGCCCTGAGT TATCGGCTTT ACTGCATATT
ACAGGAAAAG AAGCTGATGA CACTGAGCTT GCTACTGGCG AGGCTTATGC ATATTCAGGT
TTCGAGCAGC AAAATTATCT CGGGAAACTG GATTTCGAGC AGGGCGACCA TCAACTAGCA
TTGAGCTTTA CTCGCTACCT TGATGAAGGC CGTAAGCCTT GGGCGAATCG CCGTGGTGCC
ATGCCGACTA TTTCAGATTA CAACATTAAG AAATACGGCT CTTACGAGCA AGCCTTATAC
GCCACCACAT CTGATAATAC ATACAGAGAA AACACGTGGT CAGCCAATTA TCGCTATTCC
CCCAGTAACC CGCTGATCGA TACTCAAGTA GCCATTTCTC ATTCGAGCAA TGACCGTCAC
TGGATCCGAC CTGATATTGC ATGGGAAAAA ATGTTTGTTT CAGTGGGCAG TTTTGGCCAT
GAATCTTGGC TGGAATATAA ACGTGACTTT GTCGATATCA ATAACCTTAG TCGTTTTGGC
AATCACGAGC TAATCACAGG GCTACAGTAC CGCAGTCTAG ATCGAAACTC CTTAGTGTTT
AATAAAAGTT ATCAGAAAAA GGCAGAGAAA AACTTTGGCT TATACACGCC TTATTATCAG
CCAAGTGGCC GCCAAGATAC TTATGCTGCG TATATTCAAG ATAGGATCAG TCTCACCGAT
GAGCTGACCA TCAAACCTTC ACTGAGGTAC GATTATATCT ACAGCGTGGG CCGAGAAAAC
TTAGCATCAG ATTATAACGA TCTCGCCGCC GGTCATGATT ACAGTGCAAC TGACCACAGT
GGCTGGTCAC CTCGATTTGG ACTTGAATAT CGGTTATCGA CAAACCACCA ACTTAGTTTT
GATTATGCCT ACAGTTTAAT GGCGCCAGTA GTGGATGAAA TCTATGCTGT CCAATACGCC
AAGGCCAGTA TCACAGCAAC CAGCCCAGAG GTAGAGCTTG AACGGCTACA TGCTTATAAA
CTGGGATTAA CATCATCATT TAGTGACCTT TTCGCCGCCC AAGATCGACT GGCGACCCAA
GTTACCCTAT TTGCTAATCA CGGCGAAAAT GATATTGCTC AGCGACGAGG AGAAAATTCA
GATAAATCAC TGCCATTGCA GTCAAATTAT ACCAATCTGG ATGGATATAA AATGCACGGT
GTGGACATTG AGGCCCAGTA TCGTGTTGCA CGTTTCTTTA GCGATCTGGC CGCATCTTGG
CAAGCAGGTA CTCATAATGG CAGCCTGAGA GACAGCCAAG GGGATGATGA GTATTTAGCC
AATATTGCTC CGCTTGATAT CAAATTACGC CTAGGTTATT ACCTGACTGA CGAATTGTCA
TTGGCTTGGC AAGGGGCTTG GTACGATGCG CAAGATAAGG TGCCTAGCGA GGACTTATTT
AATAGTGAAT TACCCAGTGA TAACTACTTC TTGCAGCACG CTACGCTTGC GTATGAACCG
CAAGGCTCTT TGAGTGGATT GACACTGAGA TTGATGCTTA AAAACATCAC AAATGTACAA
GTGACGCCTT TCTTGTCTGA TGGCATTCCT GCTGCAGGTC GCGATGTGCG CTTAAGCGCG
GCCTATAGCT TTTAA
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| Protein sequence | MSHPDLLSRQ NHNVSPSTLG LTLACILGSF PCQVLAGNVL GVPKVTGIEV IEVSGIQHRR
PMAIVTPGEA LITMEQLEEM QASSFAEVID DMAGAHIDGG TRSGGERINI WGFGETEDLN
VYVDNAPVGF EQYRYGSFFI DPDLLKQVEV IKGAHDVRSG NGGFGGAIYA VTKSASDFLK
HDQSFGSRVK ASYASNNETK GYTATSYATF SPELSALLHI TGKEADDTEL ATGEAYAYSG
FEQQNYLGKL DFEQGDHQLA LSFTRYLDEG RKPWANRRGA MPTISDYNIK KYGSYEQALY
ATTSDNTYRE NTWSANYRYS PSNPLIDTQV AISHSSNDRH WIRPDIAWEK MFVSVGSFGH
ESWLEYKRDF VDINNLSRFG NHELITGLQY RSLDRNSLVF NKSYQKKAEK NFGLYTPYYQ
PSGRQDTYAA YIQDRISLTD ELTIKPSLRY DYIYSVGREN LASDYNDLAA GHDYSATDHS
GWSPRFGLEY RLSTNHQLSF DYAYSLMAPV VDEIYAVQYA KASITATSPE VELERLHAYK
LGLTSSFSDL FAAQDRLATQ VTLFANHGEN DIAQRRGENS DKSLPLQSNY TNLDGYKMHG
VDIEAQYRVA RFFSDLAASW QAGTHNGSLR DSQGDDEYLA NIAPLDIKLR LGYYLTDELS
LAWQGAWYDA QDKVPSEDLF NSELPSDNYF LQHATLAYEP QGSLSGLTLR LMLKNITNVQ
VTPFLSDGIP AAGRDVRLSA AYSF
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