Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2499 |
Symbol | |
ID | 4019002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2980895 |
End bp | 2981389 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637956530 |
Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
Protein accession | YP_563502 |
Protein GI | 91793851 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00036346 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACTT TACACACTAG TGCTGGCGAC ATTACGCTAC AACTTAACGA CGAAAAAGCC CCTATCACAG CTGCTAACTT CATGAAATAC GTTGAAGAGG GTTTCTTCGA TGGCACTATT TTTCACCGCG TTATCGATGG TTTCATGATC CAAGGTGGCG GTTTCACTGA AGATATGACC CAAAAGACTC CAGGTGCTGC AATTAAAAAC GAAGCCAATA ACGGTTTATC TAACCGTAAA GGCACTGTTG CCATGGCCAG AACTTCTGAT CCACATTCAG CGACAGCCCA GTTCTTCATC AATGTCGGCG ATAACACTTT CTTAGATTTT AAAGCTGAGA ACAGCCAAGG CTGGGGATAT TGCGTATTCG GCGAAGTGGT TGAAGGCATT GAAATTGTAG AACAAATCAA AGGCGTTGCC ACGGGTAACC GCGGTATGCA CCAAGATGTG CCATTAGAAG CTATCGTTAT CAATAGCGTC AGCGTTAAGG CATAA
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Protein sequence | MITLHTSAGD ITLQLNDEKA PITAANFMKY VEEGFFDGTI FHRVIDGFMI QGGGFTEDMT QKTPGAAIKN EANNGLSNRK GTVAMARTSD PHSATAQFFI NVGDNTFLDF KAENSQGWGY CVFGEVVEGI EIVEQIKGVA TGNRGMHQDV PLEAIVINSV SVKA
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